result

Gene information

Detail information of Asa4G05283

Location

Gene	Chr	Start	End	Strand
Asa4G05283	chr4	1435253056	1435255029	+

Sequences

CDS

>Asa4G05283.1
ATGAAGCTGCAAATATTAAGAGAAAATCGAATCGATTTGAGAGAATCAACGGATGAAGAACTAGATGATTCTCTGGAAGATTATACAGATAAGCTGTTTGTGCAGGCTTTAACGTCTTCTGACGTTTTCCAATGGAAAAATGATAAAAAATCAGGTGGTGTCATTTCTAGTTCTGCAACTCCAAAGCCCAAAAGAAAGAAAGTATCCAATTCTCGGCCCTTGTTTTCTGCTCCTCAGTCTCCTACTACTGTCAATAACTCTGTGGATGATGATGTTCAACGTCAACATGATGGTAATGACAAGGCTCTTGTCATATATAACAGGCCTCCTGATGTATGTGTCACAATGATTCCAACTGTCACCCCTAAGTTTTTAGGAGGCAGTAGCAGTAACAAGAACAAAGCATCCAGTCGCAGCATGGTGCAAAGAGCTCTGAGGATGTATCAACTATTTGCTAGAAGGTTCCTGCATGAAGATGAGAAATCAGGTAGGAACTCGAAAGATAAGACTGGGCCTAAAAGATATGATCTCGAGGCTGCTAAGATAATGAAAATGAATAATGAGTTTGTGAATTATGGCGAGCCGAACATTGGCTCTGTGCCTGGAGTAGAAGTCGGCGATGAATTTCACTTTAGGACGGAGCTTTCTGTTGTTGGGTTGCATCGCCCATACCAAGCAGGAATTGATTATGCAAAAATAAATAAAAAACTTCTCGCACTAAGCGTAGTTGCATCTGGCGGTTATCCTGATGATGTCGATGGCTCAGATGTTTTGATATATACGGGTTCTGGAGGAAATCCGTCAACATCGAAAAATGCGAAAGCAGGAGATCAAAAACTTGAAAGGGGTAATTTGGCATTGAAAAATTGTATTGATACTAAATCACCAGTTCGGGTTATTTATGGCGTCAAAGAATCCACTAAAGCTGATGCAGCAGACTCAAGGCCAAAGTTGGTCTCAACATTTACTTATGATGGTCTGTATATGGTTGAGAGATATTGGAAGGAGACTGGAAAAAATGACTTTTTTGTTTACAAATTTCAATTAAGAAGAATTCCCGGTCAACCTGAAATTTCACTAAAAGAAATTATGAAAGTAAAAAACTCAAAAGAGCGTGTTGGCGTTATTGCAAAAGATATATCTGATGGAAAGGAAAGTGTGCGTATATGCGCTGTAAACACAATCGATAATGAGCGGCCAGCACCATTCAATTACATAAATAAAATGGTATACCCATCCTCATATGTTCCAAAACCTTCGGCAGGGTGTGATTGCAGAAATGGCTGTATTGATACTCAAAGTTGTGCATGCGCTGTGAAGAATGGTGGCTCAATTCCATATAACTTCAACGGTGCAATAGTTGAAGCGAAGGTCCTTGTTTATGAATGTGGCCCTAAGTGCAAATGCCCTCCTTCATGTTACAATAAAGTTAGTCAATTTGGTATAAAACTACCTCTTGAAATTTTTAAAACAGCGACTAGGGGGTGGGGTGTTAGATCATTAGCCTCTATTCCTTCTGGTACTTTCGTATGTGAATATGTGGGGGAGATGATTGATTTTGAGGAAGCTGAAAGAAGAGATAATGATGAATATCTCTTTGATATTGGTAACAACTATGATGATCATTCCCTCTGGGAGGGACTTCCAAGCTATATTCCAGGGGCGTATTCCAGTGACGATCATGAAAGTATGGACAAACGTGGATTCACAATTGATGCTGCTGAATATGGCAATGTGGGTAGATTTATCAATCATAGCTGCACACCCAATCTCTTTGCTCAAAGTGTGTTGTATGATCATGATGAGAAGAAAATGCCTCATATCATGTTTTTCGCTGCTGATAATATACCGCCTTTGAAGGAGCTTACCTATCACTATAACTATGCACTAGATCAAGTCCGTGATGAAAATGGTAATATTAAGAGGAAAGATTGTTTTTGTGGTTCTCCCGAGTGTACTGGAAGGCTTTATTAG

Protein

Gene

>Asa4G05283.1
ATGAAGCTGCAAATATTAAGAGAAAATCGAATCGATTTGAGAGAATCAACGGATGAAGAACTAGATGATTCTCTGGAAGATTATACAGATAAGCTGTTTGTGCAGGCTTTAACGTCTTCTGACGTTTTCCAATGGAAAAATGATAAAAAATCAGGTGGTGTCATTTCTAGTTCTGCAACTCCAAAGCCCAAAAGAAAGAAAGTATCCAATTCTCGGCCCTTGTTTTCTGCTCCTCAGTCTCCTACTACTGTCAATAACTCTGTGGATGATGATGTTCAACGTCAACATGATGGTAATGACAAGGCTCTTGTCATATATAACAGGCCTCCTGATGTATGTGTCACAATGATTCCAACTGTCACCCCTAAGTTTTTAGGAGGCAGTAGCAGTAACAAGAACAAAGCATCCAGTCGCAGCATGGTGCAAAGAGCTCTGAGGATGTATCAACTATTTGCTAGAAGGTTCCTGCATGAAGATGAGAAATCAGGTAGGAACTCGAAAGATAAGACTGGGCCTAAAAGATATGATCTCGAGGCTGCTAAGATAATGAAAATGAATAATGAGTTTGTGAATTATGGCGAGCCGAACATTGGCTCTGTGCCTGGAGTAGAAGTCGGCGATGAATTTCACTTTAGGACGGAGCTTTCTGTTGTTGGGTTGCATCGCCCATACCAAGCAGGAATTGattatgcaaaaataaataaaaaacttctcGCACTAAGCGTAGTTGCATCTGGCGGTTATCCTGATGATGTCGATGGCTCAGATGTTTTGATATATACGGGTTCTGGAGGAAATCCGTCAACATCGAAAAATGCGAAAGCAGGAGATCAAAAACTTGAAAGGGGTAATTTGGCATTGAAAAATTGTATTGATACTAAATCACCAGTTCGGGTTATTTATGGCGTCAAAGAATCCACTAAAGCTGATGCAGCAGACTCAAGGCCAAAGTTGGTCTCAACATTTACTTATGATGGTCTGTATATGGTTGAGAGATATTGGAAGGAGACTGGAAAAAATGActtttttgtttacaaatttcaaTTAAGAAGAATTCCCGGTCAACCTGAAATTTCACTAAAAGAAATTATGAAAGTAAAAAACTCAAAAGAGCGTGTTGGCGTTATTGCAAAAGATATATCTGATGGAAAGGAAAGTGTGCGTATATGCGCTGTAAACACAATCGATAATGAGCGGCCAGCACCattcaattacataaataaaatggtaTACCCATCCTCATATGTTCCAAAACCTTCGGCAGGGTGTGATTGCAGAAATGGCTGTATTGATACTCAAAGTTGTGCATGCGCTGTGAAGAATGGTGGCTCAATTCCATATAACTTCAACGGTGCAATAGTTGAAGCGAAGGTCCTTGTTTATGAATGTGGCCCTAAGTGCAAATGCCCTCCTTCATGTTACAATAAAGTTAGTCAATTTGGTATAAAACTACctcttgaaatttttaaaacagcGACTAGGGGGTGGGGTGTTAGATCATTAGCCTCTATTCCTTCTGGTACTTTCGTATGTGAATATGTGGGGGAGATGATTGATTTTGAGGAAGCTGAAAGAAGAGATAATGATGAATATCTCTTTGATATTGGTAACAACTATGATGATCATTCCCTCTGGGAGGGACTTCCAAGCTATATTCCAGGGGCGTATTCCAGTGACGATCATGAAAGTATGGACAAACGTGGATTCACAATTGATGCTGCTGAATATGGCAATGTGGGTAGATTTATCAATCATAGCTGCACACCCAATCTCTTTGCTCAAAGTGTGTTGTATGATCATGATGAGAAGAAAATGCCTCATATCATGTTTTTCGCTGCTGATAATATACCGCCTTTGAAGGAGCTTACCTATCACTATAACTATGCACTAGATCAAGTCCGTGATGAAAATGGTAATATTAAGAGGAAAGATTGTTTTTGTGGTTCTCCCGAGTGTACTGGAAGGCTTTATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244405.1	2.3e-230	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like
Swissprot	Q8VZ17.2	7.6e-162	Suppressor of variegation 3-9 homolog protein 6
trEMBL	A0A5P1FEU7	2.9e-219	YDG domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G22740.1	54.44	3e-163	572	SDG23;SUVH6	SU(VAR)3-9 homolog 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G05283	AT2G22740.1	529	224	7	138	657	270	790	54.44	3e-163	572
Asa4G05283	AT2G22740.2	529	224	7	138	657	270	790	54.44	3e-163	572
Asa4G05283	AT2G35160.1	525	210	7	136	657	305	794	52.76	3e-157	552

Ortholog group

Species	Genes
Allium cepa	g379046.t1
Allium fistulosum	AfisC5G06207
Allium sativum	Asa4G05283.1
Arabidopsis thaliana	AT2G22740.1; AT2G22740.2; AT2G35160.1
Oryza sativa	LOC_Os09g19830.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02182.14	SAD_SRA	Domain	197	355	162.2	6e-48
PF05033.13	Pre-SET	Family	380	476	62.5	4.3e-17
PF00856.25	SET	Family	495	627	80.1	2.1e-22

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0042393	F	histone binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0016571	P	histone methylation
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0034968	P	histone lysine methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Lysine degradation	ko00310
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network