Detail information of Asa4G05353


Location
GeneChrStartEndStrand
Asa4G05353chr414658768971465879558+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247036.12.8e-115protein indeterminate-domain 2-like
SwissprotO22759.23.4e-49Protein indeterminate-domain 12
trEMBLA0A6I9RMY13.6e-96zinc finger protein GAI-ASSOCIATED FACTOR 1-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G02670.146.594e-56 215AtIDD12;IDD12indeterminate(ID)-domain 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepa
Allium fistulosumAfisC5G06021
Allium sativumAsa4G05353.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g31890.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.