result

Gene information

Detail information of Asa4G05589

Location

Gene	Chr	Start	End	Strand
Asa4G05589	chr4	1524250839	1524252597	+

Sequences

CDS

Protein

Gene

>Asa4G05589.1
ATGGAAAATGGTGTCATTCCATTTTTCGATCCCTTATCAATTGCAAGAAAATCaggtaaaataaattaataaatctgTAGGTATCATTTCATATTATTATGTGATGTAGTACATATTGTTTGGTGTAGTCGAATTTGGAgtaatatcatttcatatttttatgtgatTCAGGAATTAAATTTAGACAAACAAGCACAAAGATTGCATCATTTCGTTCCATGATAGCTACTCGTCAGCTCTCAGTGAAATTTTTTGCGCTCTCAGAGATTGAAAAGGCAACAAATTATTTCGACAACGGAAGAAAAATAGGAGAAGGTGGTTCTGGGTGTGTGTATCATGGTATATTGGATGGAAGCGATGTGGCTATTAAATTATTGAAGATAGTGGACCAGAATCATGACAGAGAGCGTGAATTTGTTACAGAAGTGGATATGCTTAGCCGACTACATCATCGTAACTTAGTCAAATTAATTGGTTTATGCTTTGAAGGAAGAAGGCCCTGCCTTGTGTATGAACTTGTCCGCAACGGTAGCGTTCAATCACATCTACATGGTATGCATCCACTGTAATATTTTTTAAAATGCTTAATGTACTGGACACCATCCATATACTATAAACTAAATATTCATCGATATCGCATTGTATATATTTCAGACTGTTCAATGGAATTTACACTATCACTGAGAATTAACTCTTGCATTTCTCATTCGACTGCACTCTGTCTATGAACTATCCTTTGGCAGTGTTTTTTCCTCCAAAAATGCAATGTCATGAACATTGAAATTTGGGTATATTAGGTGCTGATAAGGCGAAGAAACCTCTAGAATGGGATGCTCGAATGACTATTGCACTTGGTTCAGCAAGAGCCCTTGCATATTTACATGAGGATTCAATCTCCTTGCGTTATACATAGAGACTTTAAAGCTAGCAATGTATTGTTGGATGAAGATTTCACTCCCAAAGTTTCAGATTTTGGTTTGGCCAGAGAAACGTCAGATGGTTCTCAATATGTTTCTACCAGAGTTATGGGAACTTTTGGGTAAGTTTATTTAGACAAAATTGGTGTTGCTGCCTTGCTGGAAATTCTTTTGATTTTGACGAATTAAGGAGTTTAGAAGTGAATTGTTATAATTTTCATCCGTTTAGCTAACTTGCTCCAGTTGAGTCAAAGAACAACAGTATATTAGCTCACATAGTGATAAGGTTCTAGACTATGAAGGGAGGTCCTGGCTTTAGATCCTCCTAGCAACTATAATAATTTTTCTTCAATGGAAAGTGGTTTGTTATTTCATCCTATAATTGACTGTCGAGGATTCCATTTCTTTAACATATTTATACCTTGTATTTTTGCAGATATGTGGCACCTGAATATGCAATGACAGGGCACTTGCTGATAAAGAGTGATGTCTACAGCTACGGAGTCATGCTTCTGGAGCTTCTGTCCGGACGCAAACCTGTGCAAGTATTCAACACTCAGCAATACCCAGAGAGCATCGTGGTATGGGCCCGGCCTCTTATCGGAAACAAAGATGGGCTAAAACAGCTAATCGACCCTTACTTGCAGCAAAATTGCGACATTGACGCCATTGCCAAAGTGGCATCTGTTGCTTCATTGTGCGTGCATGAGGAGCCATCGCAAAGGCCGTACATGGGTGAAGTAGTTCAATCACTGAAGCTGATAGCCTTCAACAACAAAGGTGCTGTTTGCATGGGGTCTTCGTCATATAGCCCAGGGGGGCATTATCGTCAGAGAGAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273749.1	6.2e-101	receptor-like serine/threonine-protein kinase ALE2 isoform X1
Swissprot	Q8RWW0.1	8.5e-87	Protein ABNORMAL LEAF SHAPE 2
trEMBL	A0A5P1EGS6	4.5e-101	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G20300.1	55.74	2e-89	325	ALE2	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G05589	AT2G20300.1	305	85	5	36	294	327	627	55.74	2e-89	325
Asa4G05589	AT5G56890.1	306	88	6	36	286	701	1001	51.63	4e-77	285
Asa4G05589	AT4G02010.1	298	111	6	42	285	364	658	43.62	1e-59	226

Ortholog group

Species	Genes
Allium cepa	g433532.t1
Allium fistulosum	AfisC5G05904
Allium sativum	Asa4G05589.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	60	146	55.5	4.5e-15
PF07714.14	Pkinase_Tyr	Domain	150	282	58.4	6e-16

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network