result

Gene information

Detail information of Asa4G05818

Location

Gene	Chr	Start	End	Strand
Asa4G05818	chr4	1579343076	1579344539	-

Sequences

CDS

>Asa4G05818.1
ATGTCCTCCTCCCTCATCGCCCGAAGCTCCACCTCTTCTCCCACCACCACCAACCCCAACCTCCTCCTCGGCCGCTACGAGCTCGGTAAACTCCTCGGCCACGGAACCTTCGCCAAAGTCTACCTTGCCCGCAACCCTTCCACCAACGAGTGCTTCGCCATCAAAGTCCTCGACAAGGAGAAAATCCTCAAATCCAACCTCGTCGCCCACACCAAACGCGAAATCGCCATCCTTCGCCGCGTCCGCCACCCGAATATCGTCCAGCTCCACGAGGTCATGGCCACCAAATCCAAAATCTACTTCGTCATGGAATACGTGCGTGGGGGCGAACTCTTCCACAAGGTCGCCAAAGGCAGATTGAAGGAAGACGTTGGCCGCCGCTACTTCCAGCAGCTCGTCTCCGCCGTCGAATTCTGTCACGCGCGAGGCGTTTATCACCGCGATCTGAAGCCGGAAAACCTATTGCTCGACGAAAACGGCGACCTGAAGGTCTCCGACTTCGGATTGAGCGCCGTCTCCGATCAGATGAGGCAAGATGGACTGTTCCACACCTTCTGCGGCACTCCTGCTTACGTGGCACCGGAGGTGCTCGGTAGAAAGGGATACGACGGCGCTGCTTATGATGTTTGGTCTTGCGGGGTTATCCTCTTTGTATTGATGGCAGGTTATTTGCCTTTTCATGATCAAAACGTGATGTCTATGTACAGAAAGATTTACAAAGGTGAGTTCAGATGTCCAAGATGGTTTTCAGGCGATTTGGTTAAGCTTTTGAGGAAGATGTTGGATACAAATCCGAGGACTAGGATTACAATCAAAGAGATTATGGAAGATAAATGGTTCAAAAAGGGATTCAAACGTATCAATTTCTACATTGAGAACGATAGGTTTTGCTATAAGAGAGATGATGATGCTGAAAATGAAGAGGATGATGCAGCACATTCCGATGAAAATGAAAATGAAACGGATGCGGAGGAGTCAGGGAACGAGTCTGATTCTTCGGTAGCATCATGTCCTGCTACGATATCCAGTGGAAGGAGGAAAGGATTGGGGAACTTGCCGAGGCCATCTAGTTTGAACGCTTTTGATATTATATCATTTTCTAGAGGATTTGATATATCCGGGCTTTTTGAAGAGAGAGGAGAAGAGACTAGGTTTGTATCTGGAGAGCCGGTATCGACCATTATATCGAAACTGGAGGACATTGCTAAGGTTGTTAGTTTCTCCGTGAGGAAGAAGGATTGTAGAGTGAGTTTGGAAGGCACAAGAGAAGGGGAGAAAGGACCGCTGACGATTGGAGCTGAGATATTCGAGCTTACACCTTCTCTTGTCGTGGTTGAAGTGAAGAAGAAGGCCGGCGACAATGGAGAGTACGAAGAGTTTTGTAGCAAGGAGTTGAAGCCTGGCCTGAGAACTCTTATGTACCCAGCTGCATTACATTCGGAGGTTGCTTCTGAAGCTAAGTAG

Protein

Gene

>Asa4G05818.1
ATGTCCTCCTCCCTCATCGCCCGAAGCTCCACCTCTTCTCCCACCACCACCAACCCCAACCTCCTCCTCGGCCGCTACGAGCTCGGTAAACTCCTCGGCCACGGAACCTTCGCCAAAGTCTACCTTGCCCGCAACCCTTCCACCAACGAGTGCTTCGCCATCAAAGTCCTCGACAAGGAGAAAATCCTCAAATCCAACCTCGTCGCCCACACCAAACGCGAAATCGCCATCCTTCGCCGCGTCCGCCACCCGAATATCGTCCAGCTCCACGAGGTCATGGCCACCAAATCCAAAATCTACTTCGTCATGGAATACGTGCGTGGGGGCGAACTCTTCCACAAGGTCGCCAAAGGCAGATTGAAGGAAGACGTTGGCCGCCGCTACTTCCAGCAGCTCGTCTCCGCCGTCGAATTCTGTCACGCGCGAGGCGTTTATCACCGCGATCTGAAGCCGGAAAACCTATTGCTCGACGAAAACGGCGACCTGAAGGTCTCCGACTTCGGATTGAGCGCCGTCTCCGATCAGATGAGGCAAGATGGACTGTTCCACACCTTCTGCGGCACTCCTGCTTACGTGGCACCGGAGGTGCTCGGTAGAAAGGGATACGACGGCGCTGCTTATGATGTTTGGTCTTGCGGGGTTATCCTCTTTGTATTGATGGCAGGTTATTTGCCTTTTCATGATCAAAACGTGATGTCTATGTACAGAAAgatttacaaaggtgagttcagATGTCCAAGATGGTTTTCAGGCGATTTGGTTAAGCTTTTGAGGAAGATGTTGGATACAAATCCGAGGACTAGGATTACAATCAAAGAGATTATGGAAGATAAATGGTTCAAAAAGGGATTCAAACGTATCAATTTCTACATTGAGAACGATAGGTTTTGCTATAAGAGAGATGATGATGCTGAAAATGAAGAGGATGATGCAGCACATTccgatgaaaatgaaaatgaaacggATGCGGAGGAGTCAGGGAACGAGTCTGATTCTTCGGTAGCATCATGTCCTGCTACGATATCCAGTGGAAGGAGGAAAGGATTGGGGAACTTGCCGAGGCCATCTAGTTTGAACGCTTTTGATATTATATCATTTTCTAGAGGATTTGATATATCCGGGCTTTTTGAAGAGAGAGGAGAAGAGACTAGGTTTGTATCTGGAGAGCCGGTATCGACCATTATATCGAAACTGGAGGACATTGCTAAGGTTGTTAGTTTCTCCGTGAGGAAGAAGGATTGTAGAGTGAGTTTGGAAGGCACAAGAGAAGGGGAGAAAGGACCGCTGACGATTGGAGCTGAGATATTCGAGCTTACACCTTCTCTTGTCGTGGTTGAAGTGAAGAAGAAGGCCGGCGACAATGGAGAGTACGAAGAGTTTTGTAGCAAGGAGTTGAAGCCTGGCCTGAGAACTCTTATGTACCCAGCTGCATTACATTCGGAGGTTGCTTCTGAAGCTAAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263935.1	2.2e-214	LOW QUALITY PROTEIN: CBL-interacting serine/threonine-protein kinase 12-like
Swissprot	Q9SN43.1	2.7e-188	SOS2-like protein kinase PKS8
trEMBL	A0A6I9RD28	4.3e-199	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G18700.1	69.75	0.0	694	ATWL4;CIPK12;PKS8;SnRK3.9;WL4	CBL-interacting protein kinase 12

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa4G05818	AT4G18700.1	486	130	3	1	486	1	469	69.75	694
Asa4G05818	AT5G45810.1	461	116	6	16	472	18	460	70.07	660
Asa4G05818	AT1G29230.1	481	128	4	6	485	54	510	68.19	642

Ortholog group

Species	Genes
Allium cepa	g355324.t1; g445183.t1; g454613.t1
Allium fistulosum	AfisC5G01096; AfisC5G02253; AfisC6G01658
Allium sativum	Asa4G05818.1; Asa8G04852.1
Arabidopsis thaliana	AT4G18700.1; AT5G45810.1
Oryza sativa	LOC_Os01g55450.1; LOC_Os05g43840.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	26	280	251.8	6.1e-75
PF03822.11	NAF	Domain	355	411	82.7	1.4e-23

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0007165	P	signal transduction
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network