result

Gene information

Detail information of Asa4G06052

Location

Gene	Chr	Start	End	Strand
Asa4G06052	chr4	1651307408	1651309988	-

Sequences

CDS

>Asa4G06052.1
ATGAACTCACCTGCAGTAGCTATGTTCTTTTTCCTTGCTAGCATCTTACTTCTCGTCACTGTTCTAAGTTTAATAGCTGTAATATGGAAATATATTAGACCAGATACTTTGAAGAAGCTACTATCATCCTCTATGCAACTTCCAGGTACAGATTACTGCAGCGGCTATCTTCGATGTATTAGTTACTTCGACTATCGAACTCTTAAAAAAGCTACAAATAATTTCCACCCCAACAACCAACTTGGTTGTGGAGGTTTTGGGCCAGTTTATCAGGGAACATTGGATGATGGGACAATGATAGCAGTGAAGCAACTATCAGTAGGGAAATCTCAGCAGGGCGAATCAGAATTCCTTACTGAAGTTAGAATGATAACAAGCATTCAGCACAAGAACATGGTTCGACTTGTTGGCTGCTGTGCTGAAGGAGAACAAAGGCTGCTCGTCTACGAGTACATGAAGAATAAAAGTCTGGACAGTGTACTCTTTGGTAACAATGCAATTTTCTTTAACTGGAAGGTTCGATATCAAATCATACTAGGCGTTGCACGTGGGCTTCAATATTTGCACGAAGATTCGAATTTAAGAATTGTTCATAGAGATATAAAAGCTAGTAATATACTTCTCGATGATAAGTTTCATCCCAAAATAGGTGATTTTGGTTTAGCCAAGTTTTTTCCTGAAGATCAAGCATATTTAAGCACTGCTTTTGCTGGAACACTAGGTTATACGGCACCAGAGTATGCAATCAGAGGCGAACTTTCAGAAAAAGCAGATATATACAGTTTTGGTGTTCTTTTGCTTGAGATTATAAGCTCTAGGAAGAACACAGATCTTTCACTGCCAGTTGAAATGCAGTATCTTCCAGAACATGCCTGGAGGCTTTATGAGAAGTCTAGTGTGATAGATTTGGTGGATCCAAAACTACAAGAGGATGGCATAACGGAAAGCGAAGTGCTGAACACGTGCAAGGTCGCGTTTCTATGCCTACAACCACTGCCAAGATCAAGGCCACCAATGTCTGAAATAGTGGCTATGTTAACTATTAAAGGAAACCAAATGACTTCTCCCATGACACCGACTATTTTGTATAGGAAAAATAGAGAAAACAAAGAAATGTCGTGGGAGAGCGTGACTGAGATGCAGCCTTCGTCAATGGTCACGGAGTCGAATTTCTCGCCTTCGACGATGGATGAAAAATATAATGATAATTCACTGGAGGTTTTGCCACCTCTGCTGAGAAAATTTTCAGCTGCCGGTTTTAAGTAG

Protein

Gene

>Asa4G06052.1
ATGAACTCACCTGCAGTAGCTATGTTCTTTTTCCTTGCTAGCATCTTACTTCTCGTCACTGTTCTAAGTTTAATAGCTGTAATATGGAAATATATTAGACCAGATACTTTGAAGAAGCTACTATCATCCTCTATGCAACTTCCAGGTATCCTTTTCTTCTTCATATTATGGTTCAAAGATTATTTTTGTAAATTGTTGTTTTTTTATTAGGTACAGATTACTGCAGCGGCTATCTTCGATGTATTAGTTACTTCGACTATCGAACTCTTAAAAAAGCTACAAATAATTTCCACCCCAACAACCAACTTGGTTGTGGAGGTTTTGGGCCAGTTTATCAGGTACGGTAGATTTTACATGAAATATCCTCATGTAATTTGTTGTATTATTAGAGCATTGATGTATGCATTATCAATTTGTTTATTGGCAAATACTAACTAGGAACACaatcaaattatataaatgatttagGACTAAATCTTGTTGTTGTGGCAATGTATAACCATGCTGTGACATTTGCCTGTAACCACTCCGCAAAGTTTCACATCTGCGAAATCCTAAGGCTCCGTTTGGTTTCGTTTTGGATTTcgagttttgatttttttgttttcagCTTGCACTAAGAAATATTAAGAAATAATATCAAGAAGACAATAATCCTTAGTCATTTTGTGTACCAACGGAGAACGATAGGTTTAATTGTTCTTCGTGCTTTTGTTATTTTCCAAAATACGTAAAACGAAACACACTTATTTTCCATTTTACATGGTAAATTCATTTTTCAGAattgtttttttctttcaaaagtatGTCTGACTTGTggatttttatttagacataaatacaaaactaaaaactaaaaactaaacGGGGCCTTATATTTTCTGTTTTAAGAACTCTAAATTCCCATTCACCATTGTGGAGCTAAAGCTTGCCTTGTAAAATTTGACCAAGAGAATAGTAATTTGGtcagttgaattcatattcattcGTTCTGAGTTTTAAGAACAGAATTTCGTTTAGAACAATAAGACGAGTAATTTACAAGCTTGGTTCATATCATGGATGTAACATTAATACGGGAAAGGGAAGAAGGAGAATATATAGCAGTATCCTATTATTAGATGTACTTACTATTCATCAAATCTCTGAAAAAGGAAATTTCTAGATCATTGttgaatatatattattgttgGAACAGGGAACATTGGATGATGGGACAATGATAGCAGTGAAGCAACTATCAGTAGGGAAATCTCAGCAGGGCGAATCAGAATTCCTTACTGAAGTTAGAATGATAACAAGCATTCAGCACAAGAACATGGTTCGACTTGTTGGCTGCTGTGCTGAAGGAGAACAAAGGCTGCTCGTCTACGAGTACATGAAGAATAAAAGTCTGGACAGTGTACTCTTTGGTAACATCAAATTCCCCATTGCATACTATATCATTCACATACGTACcgaattataatattttgtttgataAAACAGGTAACAATGCAATTTTCTTTAACTGGAAGGTTCGATATCAAATCATACTAGGCGTTGCACGTGGGCTTCAATATTTGCACGAAGATTCGAATTTAAGAATTGTTCATAGAGATATAAAAGCTAGTAATATACTTCTCGATGATAAGTTTCATCCCAAAATAGGTGATTTTGGTTTAGCCAAGTTTTTTCCTGAAGATCAAGCATATTTAAGCACTGCTTTTGCTGGAACACTGTAAGTAGCCGTTTCAACATGGTTACAAAAGGCTTAAATTTTACCCGTAATATTGTATCATTATTTAGTGTgcgaaattatattatttttatgtttcttcGACTATACGATTAAAGACAAATTGAGCATTTGACATGACCGATGTGAACTTTTCCTTTCAGAGGTTATACGGCACCAGAGTATGCAATCAGAGGCGAACTTTCAGAAAAAGCAGATATATACAGTTTTGGTGTTCTTTTGCTTGAGATTATAAGCTCTAGGAAGAACACAGATCTTTCACTGCCAGTTGAAATGCAGTATCTTCCAGAACATGTATGTTTTAACTTACACTTAATAATGAATCTGTTTTGGGGGCTGTAGACAATTTAAACATCATTTCGTGTGACTAATTTGCACAAAAACCTTCTGAATTTCTAAACTGTTACAGTTAATATAACATTGCTGAAATAAGTATTTGTCATGCAGGCCTGGAGGCTTTATGAGAAGTCTAGTGTGATAGATTTGGTGGATCCAAAACTACAAGAGGATGGCATAACGGAAAGCGAAGTGCTGAACACGTGCAAGGTCGCGTTTCTATGCCTACAACCACTGCCAAGATCAAGGCCACCAATGTCTGAAATAGTGGCTATGTTAACTATTAAAGGAAACCAAATGACTTCTCCCATGACACCGACTATTTTGTATAGGAAAAATAGAGAAAACAAAGAAATGTCGTGGGAGAGCGTGACTGAGATGCAGCCTTCGTCAATGGTCACGGAGTCGAATTTCTCGCCTTCGACGATGGAtgaaaaatataatgataattcACTGGAGGTTTTGCCACCTCTGCTGAGAAAATTTTCAGCTGCCGGTTTTAAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264627.1	4.5e-171	putative receptor-like protein kinase At4g00960 isoform X1
Swissprot	C0LGH3.2	8.8e-87	Probable LRR receptor-like serine/threonine-protein kinase At1g56140
trEMBL	A0A5P1EUA4	3.3e-171	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G56130.1	54.04	5e-90	328		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa4G06052	AT1G56140.1	285	127	2	63	347	681	962	54.39	4e-90	328
Asa4G06052	AT1G56130.1	285	128	2	63	347	682	963	54.04	5e-90	328
Asa4G06052	AT1G56120.1	285	132	2	63	347	698	979	52.63	4e-87	318

Ortholog group

Species	Genes
Allium cepa	g156831.t1
Allium fistulosum	AfisC5G02454
Allium sativum	Asa4G06052.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g56360.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	78	345	158.1	2.3e-46

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network