Detail information of Asa4G06139


Location
GeneChrStartEndStrand
Asa4G06139chr416783224561678326908+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253413.12.5e-112transcription termination factor MTERF5, chloroplastic
SwissprotF4JVI3.12.0e-79Protein MTERF DEFECTIVE IN ARABIDOPSIS 1
trEMBLA0A5P1FH901.8e-112Transcription termination factor MTERF5, chloroplastic

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G14605.162.562e-154 542MDA1Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag105191.t1
Allium fistulosumAfisC4G05612
Allium sativumAsa4G06139.1
Arabidopsis thalianaAT4G14605.1
Oryza sativaLOC_Os02g39040.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02536.11mTERFFamily194377116.21.3e-33
PF02536.11mTERFFamily35146482.22.9e-23

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15032MTERFD; mTERF domain-containing protein, mitochondrialEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.