Detail information of Asa5G00079


Location
GeneChrStartEndStrand
Asa5G00079chr52667931326682855+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAKN63432.12.8e-99nuclear factor-Y
SwissprotQ14919.33.9e-21Negative cofactor 2-alpha
trEMBLA0A0H4BGD22.0e-99Nuclear factor-Y

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G12480.169.911e-41 166NF-YC11nuclear factor Y, subunit C11

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Ortholog group
SpeciesGenes
Allium cepag314071.t1; g339463.t1
Allium fistulosumAfisC2G00417
Allium sativumAsa5G00079.1
Arabidopsis thalianaAT3G12480.1; AT5G19490.1
Oryza sativaLOC_Os05g41450.1; LOC_Os11g34200.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain87165.63.2e-18

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08066NFYC, HAP5; nuclear transcription factor Y, gammaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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