result

Gene information

Detail information of Asa5G00099

Location

Gene	Chr	Start	End	Strand
Asa5G00099	chr5	29448183	29450899	-

Sequences

CDS

Protein

Gene

>Asa5G00099.1
ATGTACATTTCTGATCATCAAGAAGGCGATTTATCTGACATCATTCGCAGCGCTAACCTTACTATCCAGTCAGAAACTGACCATGACAGATGGAAGTTTCCTGAAGATTCCGAGGCTTCTTTTCAGCATCTTCCAACAAAAGGTTTTGATACTAATAGTAGCATAAAAGACTCCCTGTTACATGGTGGTGACCAGATGCTAGTTGATCAGAAAACCTTGAGCGTTGATGATAGTATGAGAACACCGAACAATAATATCATTCCTCGCGTTTTTCAGCTTTCATCACCTATAAAACAATCAGAGTTGGTGTTAGGGCAAGGAGATACCATATCTTCGCCTTACATTTCTGGTGTCAAGAGAAGGTATGTATACCATAAATATATTGTCAATTTTCTTATGTTAAACCCGAAAGAAGCGGCTGTATAACATATATCTGAGCACCAAATTGGTGAGTTCAAGATCAATTTATGATTGTGTTGTATAAAACTTTGATTTATTCACATGTATGCTATATGCTTTTGATTTATCAGACTAGCAAATGAAACCTATCACCGCATTAATAGACAGTGTTTCTTttcttaagttaaaaaaaaaaaagacattttaaAGCAGGAGGGTTTAtcgtttttatgaaataaaatgttgcattagtttAGTAAGAAATTTGTATATTGCTGAACAAGTGTATGAAATTAATATTGCATCTTTTATTTTTACACAACTAAAATATGTATAATTATCCAGAGTTTTGGCACAATGTTATGGTAACCAAGTATCGGAAGCAGATGGTCATGCTTCTACAAATGaggaaaaaaacataattttaacacTTAACTGTTCATTACTTCGTTGTAAttgtaaatataatttgatttctgGTAGTTTGATGGTATGTTAggtttttattttcgatctcagtgaatttaaatatattattttgagtaaGTTCCAAGATAGAAAGCTCTCCTTCTTTATACCTAAAGAACATAAATTATATGCTTCATTCTCATTGAAATAATTAGTAAATcaatcattaatatatattttttctttccctttttgattaatTACAGGAAAAGTCTGCCAAGAAAAGTAGTATGTATTCCTGCAGCAGGAAACACAAATACTAGTAGTGGTAGGGCTACCTGTAGGGCTACCAGTGGAGAATGTTGTTCCTTGTGATCTCTGGGCGTGGAGAAAATATGGTCAAAAACCTATAAAAGGTTCTCCTTATCCCAGGTAATACTTTTCTAACATTTGTATAGCAGAATATTATGTCAACATATTGGTAAATGAATGTgtatattttacttatttaattttggaaagtctaaatgaacacaaaatgttgacagaAAATTAAACATAGAAAATCTGAATCATTAGATCTTCTTCTGAATTTTACCTTCCACCTAaaaacaaacaaatcttgtggtccaaattctatatatatatatttgtgttgaattttgTATCTCAGTAGCTTCTCCTTTGAATTTTTACCTTAAACGGtactattggatttggaattatatatcTACTCCAGTGTAAAGTCAAGGTTGAGTTTTAAATGTTATGTACCACTGAGTCAAAAAATTATggttcaaataataataataataaagaagcaGTTTAGCAATGTTCCGTATATCTAAAGTGCACCATCATTTTGAGCATTTATATCTTATTGATGTTCAATGTCCATCAGTAGATTTCTGCTTTAATGTTGCATCCATCAGTAGATTTTCAACAATATGAAATCTCCTGACCTAATATTTTGTGCCGTGTCTTCCAATAATTTCAGTATTCTCTTAtgatacatgaattattttatgcAGTTATTAAAATAGGGGACAATTATATAATGCAGTGATACATGAAAAAGCAATAATTCACtaataaatttttcattttaaacccagaaaaatatattggatatgaCTACTATTATCcttatcagtatttattttatcaaaaatgctactattacaaaaaaaaaaaaaaaaaaaaaaaaaagtttctatCAAAACAAGTTTTTGTCGATTAGTACATCACAGATGCGATTTTAGGATGGATcacatattaaattataatgttacCCTCCTCAATTCCTCCAACCTCTTTAGATTACACTATTATAgtattttgacaaaaaattgatTATGTCATAGTAACAAAACTATTTTTTTGATCACTAAAAGAGTACATGATGCATGAAATAACGCAGGGGATATTACAGATGCAGCAGTTCAAAAGGATGTGCAGCAAGAAAACAAGTAGAAAGAAGCAGAACTGATCCAAATATGCTAGTCATCACTTACACTTCTGAACACAATCATCCTTGGCCGACTCAAAGAAATGCACTTGCGGGCTCAACTCGATCCTCCTATCCATCCAAACACCCAAAGCCACCCCCCtctacaaattcaagttcaaaagatACAAACAAAACATCAACAACAGCATCAACCTCGGGTTCAACTTCTATTAGAGAAGAAGCATCGGAAACAATGAATGGAGCAAATGAAGTGTTGCATGATACGTGTATGGAAAACGATGATTTGTTTGCGAATTTAGCAGAGTTAGAGAATGATCCAATGAGCCTATTatttgaaaaatcagatgtgaagaataatggAAAAAATTGCAAGGAGGTTGATGATACATTTGATGATATCTTTGATTGGGGGCAGAGTTCGTTTGTCGATCATTCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	THU55360.1	1.6e-26	hypothetical protein C4D60_Mb11t05740
Swissprot	O64747.1	1.9e-21	WRKY DNA-binding protein 35
trEMBL	A0A4S8J1Z4	1.1e-26	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G30650.1	45.26	2e-27	119	AR411;ATWRKY14;WRKY14	WRKY DNA-binding protein 14

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G00099	AT1G30650.1	190	78	5	105	270	226	413	45.26	2e-27	119
Asa5G00099	AT2G34830.1	184	74	4	105	256	224	406	41.85	2e-25	112
Asa5G00099	AT4G01250.1	143	59	5	104	236	136	267	44.06	5e-20	94.7

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC2G00398
Allium sativum	Asa5G00099.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	121	155	39.0	6.7e-10

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13425	WRKY22; WRKY transcription factor 22	EC:-	MAPK signaling pathway - plant	ko04016
K13425	WRKY22; WRKY transcription factor 22	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network