result

Gene information

Detail information of Asa5G00182

Location

Gene	Chr	Start	End	Strand
Asa5G00182	chr5	51912884	51917415	-

Sequences

CDS

Protein

Gene

>Asa5G00182.1
ATGCAGCAACAGTTTGTTTTCCTTACCGTCATCGCTTTCTCTCTGATCATCAGAAGCTTTTCTAAGTTGACCACCATAAGCCTTGCTCAACCTCTCCCTTATGGTGAAACCTTAGTTTCTTCAGACGAGACGTTTGCTTTGGGTTTCTTCGCTCCTGCTGCTGATTCCGATAAGCATTATCTTGGTATTTGGTACAATAAATTACCTACTCAAACCATTGTATGGGTTGCGAACCGTGAAAACCCAGTTCACGGAAGCATAGGCTTACTATCAATCAGCAATAATGGCACTCTCTTGATTACCGGTGGAAACTCAAATGTCATTTGGTCATCTTCTTCATCATATTCAGATATTGCTGCTAATCCTGTAGCTGTCTTATTAGATTCTGGTAACTTTGTTGTCACCAATGGTTACGATGTAAAAAACAACATTTTCGCCTGGCAGAGCTTTGATTACCCAACCGATACGATTTTACCAGGAATGAAAATTGGTTGGAACATAACAAGTGGGCTCAATCTCAACCTGACCTCATGGTCGAGCTCGTCAGATCCATCCAGAGGCAACTTCACTCTGGCTGTGGACCTTAGAGGCGATCCACAGTTAATATTCTGGGCTGGGTTGTCTCGTACGCTTAGATCCGGTCCATGGACCGGACAGTACTTCAGTGGATTAGCGCCCTATAGTCCCGATATCGATAATGTCTTGATGTTCGGTTTCGTGGATACGAAGAAAGAAGTTTACTTCACTATTGAAGCAATCAACTCTTCTTCGATATCTAGGCTTGTTTTGAATTCTTCAGGGGTGTTGCAACAGTTTGTGCTATTGGATTCGGGTCAGTGGGGTATGTATTGGTACACACCAAGGACTCAGTGCGACTCGTACCTTGCTTGTGGGCCACATGGGGCTGGCTGCTATGTGGATGGATCACCAATGTGCAGTTGTTTACCGGGTTATACTCCCAAAAATACAGGTAACTGGGCTTTGAGGGACTGGACTGGAGGGTGTGTTAGAAAAACAAAGTTAGACTGTCGGAATGGGACCGATGGCTTTGTGAAGGTGCAAAGAACGCTATTGCCAGACACTGTAAGTGCGACCGTCAATTCAGGTTTGAGTTTGAGCGACTGCAGAGACGTTTGCCTGAAAAATTGTTCATGTACTGCATATGCTAGCGCCGATACACGCGATGGTGGAAATGGGTGTATATTATGGTCAACCGAGCTTTCTGATATTCTGGTGTACACTAACGGAGGCCAggatctctttatgagattggcaGCAGCAGATTTAGGTACCTACTTTTGGTTTGATATGTACATAAGCTTGTGTTTACTTATGATGGAATGTGCAAGTTGTTCAGAATAGTATAGTAGCACTAAACAGTTTAATGACATAATGATTGACATGGCCTTTTTGCTTACAATTATGAAATACCCTGATAAGAACAGTCTGTCTAGTTGAACGTATGTGGTCCACTTTTCTGTTAAGTGCTCTCCCATTTTTGGAATCTAGTTTCTGAAGGCTTGCTGCCTCATCTGTGTTtccatttataacttttatttatgcgCTTGTTCGTGTCCATATCAATAGAACATTATGAGAACTGAAAACATAGTACAGAAAGTTTAACCAACTACTTTCCTGTTATAATTTATGTACCTTACGTCCCTTTATGCAAGATTATAGGCTACCCATGGTCTTCTCGTCTCTAGAATCACTAAAGAATAGCATCCGTTAATAGTGAAGATAACATTAGAAGCTACCATCTTATAATTTAACCTGTACCACGAGATATAGAAATATATGATTAGTTTTAAGTTttggttaaaatgataatttaatatctgCACTCTTTTCCCCGATGCTTGCATTAGCATTCCAATTTTGACTTGTAGTCTCTCTCACAACAACCAGCACTTTATCCGCCTGTCAATCAGTGGTCAAAGATATATATCAGTGGGAAAATACATCACCATTGTTGTTGACTACTGcttatctaattaattattaaaaaaacttATGCTATACAGTGGATGTAATCATCAGGTTTAGCAAGCTCAAACCAGGATCATAAGAAAAATGCAACCGTGGCCATAGTGCTTTGTTTAACCCTGGGGATATTTATAATGAGTATTGTTTCCTTTGTCTGGAGGACGAGAAGGAGAACTGCAGGTAGAATGCCTATTACTGATTAGTTATGAACCAGTCAATTTGAACATACTCCTAGTCGAATATTTATCACTCTACTTTTTTATAGGCAATACCTTTGTTGGTGAGAATGTTGCGGAGAATGCTGACGAGGATGAAATGGAGCTACCACTTTTTGATTTGGAAACTATAGTTGAAGCAACAAATGACTTTTCTGACAAAAATAAACTTGGAGAGGGTGGATTTGGTTCTGTTTACAAGGTTAAACTTCAACATTGGCCATACCACTTTATAAATTTTTACAGGTGTGATTCTGTGAAGCTGCTTATATGCTTCAGCAGCTATGAACAGTTCAACCTTTTTGTTCTGGATAAATGCTCGAATTCTCCTATAATATGGCTGTTGAACTTTTTTGCAGAATCATATATCTAAGATAGAAGAAAGTAAATCATAGTTAGTGATCTGTGATATTATGACATGTAATTTCTTTGGTTGAAGTGCAAGTTTGAAATTGCTTTCATATTTTCCAGTACCTTTTAAATGTCGAAAGAGTAAGCTTGTTTGCCATATTTaagtttttaaatgatttaatgTTTTCAATGCTCATCGGGCATCTTTATTTAGATCAGTTCTCATCGTTAGTGTGATTTATTTGGGTACATATGATTTCATATAGTAGTTTGCATGTACATTATCCTGTTGTgacatctttttttttaaattaaacactaATATCTTGATGGTGGAATTATAGGGAACAGCGAGGGAGGGACAAGAGATAGCCGTGAAGAGACTATCTAAAACTTCATCACAAGGTTTCGATGAACTAAAGACGGAAGTAGTATTAGTAGCAAAGCTTCAACATCGTAATCTTGTAAGGCTTCTAGGATGTTGCATCCAAGGAGATGAAagaatgttaatttatgaatacaTGCCAAACAGGAGCTTAGATGCATTTCTTTTTGGTATGCTAAATCCAATACCTTAGGCACTTTCCATGCTCattatttctctttcttttatcattCATATGACATGCTATGTATAGGTGGATGCGCAtaatttcttgtttgtttttccttttccTATCAATGAAATTAgctttttttttttccctttggAACAATTGCTCACAAGCCAGTTAGTTACTAGGACGTAAAATGAAACTTCATGGCAATTCGAGGAAAGTGATTTGGATTGAGATAATAGTTTTGAAGATCTGTATAAGGTTAAATATGCATCCTCCTGCAACTGTAGTAACCTTTCTGGCATTTCTATTATCAAATTAATTTGTacagaaaataagaatatatttttgtatttaaaatattgatataggcTTGAAATTTTGGAATCGATGGATTAATCCATAACCTCAGTGGACTTAATTTTTCATGAGTAGAAGTTCAAAATTGGCAGAATCAAATTAGTTTCATTTCATGGTAATCTTTTGTTACTTCTAAAGTTTTTCACTCCATCATGACATCCATTATTGTTCTAAATATGCGTATATAATTCTTTTTTTCACGCAGATGAAGAAAAGGCCGTGTTGCTAGATTGGGCATCACGCTATCACATCATTGTAGGAATAGCCAGAGGTCTTCTTTACCTCCATCAGGATTCGAGATTCCGGATAATTCACAGGGACCTTAAAGCAAGCAACATTCTTCTAGATAAAGATATGAATCCTAAAATATCAGACTTTGGGTTGGCCAGAATATTTGGAGAAGACGAGACAAAAACCAAAACAGCAAGAGTAGTTGGCACATAGTAAGGCACTCGCCATCTTAACATACTAAAAATTTACCTTCATTTACTCAGCCGATAACGGTGTGTCGTTAACGTGCAGTGGGTATATGGCACCAGAGTATGCACTTAATGGGATAATCTCAGTAAAGAGTGATGTATTCAGCTTTGGTGTTTTAGTTCTGGAAATTATAAGTGGAAAGCGAAACAAAGGAGTTTATTTGTCCGAGGCTGAGCAATATCTTCTGGGCAGAGTATGTATATTCCGAACCTAACAATTAAATCTAACCGTTTTTCGTTCTGTTACATGAAAACATAGGCTGAGTTTCTTGATTTTGTAGGCATGGACTTTGTGGAGAGAAGGAAATGGGGTGCAGCTAGTAAGCTCATCTATTCAACATTCTATCTGCGTAGAAGAAGTTATAAGATGTATTAAAGTGGGACTTCTGTGCATTCAAGAGAGACCCGAGGACAGGCCGACGATGTCATCTGTATGTTTGATGTTAAGTAGCGAAAATACAAATTTGCCGCAGCCTCAAGAACCTGCCTTTCTTCAAAGACGAAACAGTGCCAGAGAAGGTATCTCTTCCAATTCAAATAGCATAAATGATTTGACTGTAACAATGGGTATAGGTAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	AIZ68213.1	4.8e-286	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	O81905.1	3.9e-216	S-domain-1 (SD1) receptor kinase 8
trEMBL	A0A0A7LYW8	3.5e-286	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	48.10	0.0	763	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa5G00182	AT4G21380.1	788	368	11	37	796	45	819	48.10	763
Asa5G00182	AT1G65800.1	813	380	15	12	792	22	813	46.74	725
Asa5G00182	AT1G65790.1	834	397	14	12	815	22	832	46.04	716

Ortholog group

Species	Genes
Allium cepa	g275833.t1; g90639.t1
Allium fistulosum	AfisC2G00008; AfisC2G00014
Allium sativum	Asa5G00182.1; Asa5G00187.1; Asa5G00189.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	71	181	105.0	1.8e-30
PF00954.17	S_locus_glycop	Domain	212	322	82.5	2.6e-23
PF08276.8	PAN_2	Domain	343	410	74.3	5.4e-21
PF07714.14	Pkinase_Tyr	Domain	509	774	171.2	2.3e-50

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network