result

Gene information

Detail information of Asa5G00187

Location

Gene	Chr	Start	End	Strand
Asa5G00187	chr5	52346866	52350782	-

Sequences

CDS

Protein

Gene

>Asa5G00187.1
ATGGTTATGTTGTTGAATTCTGGCAACTTTGTAGTCACAGCTGGTTATGATAACAAAAGCTTTGCCTGGCAGAGCTTTGATTACCCAACTGATACGCTTGTGCCAGGAATGAAAGTTGGCTGGAACCTGATCAGTGGGATGAATATCAACTTGACATCGTGGGCAAGCTCATCTGATCCATCTACAGGCAATTTCACTATGGCTGTGGACCTTAGAGGCGATCCACAGGTGATATTCTGGGCTGGGTCAGTCCGTAGGCTTAGATCTGGTCCATGGACTGGGCAGTACTTTAGCGGGTTGGCACCCGATACATCCGATCAAAACAATGCATTGATGTTCGGATTCGTGGACACGAAGCAAGGTGTTTACGTCACCGTTCAAGCAATCAACACTTCGTCGATATCTCGGCTTGTTCTGAACCCTTCAGGTGCGTTGCAGCAATTTGTGCTATTGGATTCGGGAAAATGGGGTCTTTATTGGTACACACCAAGGACACAGTGTGACTCGTACCTTGCTTGTGGGCCATATGGCACTGGTTGCTACGTGGATGGACCGCCAATGTGCAGTTGCTTGCCGGGTTATGTTCCTAAAAGTGCGGGTAACTGGGCTTTAAGGGAGTGGTCTGATGGATGTGTTAGGAAAACAAAGTTAGACTGTAGGAATGGAACTGACGGCTTTGTGAAGGTGCAGAGGACGCTTTTGCCAGACTCTGTGAGTGCAACTGTTGATTCAGGGTTGAGTTTGAGTGACTGTAGAGATGTATGTCTGAAAAATTGTTCGTGTACTGCATATGCTAGCGCCGACACACGCGGTGGTGGAAGTGGGTGTATATTTTGGTCAACTGAGCTTTCTGATATTCTTGTGTATACTAATGGAGGCCAGGATCTATTTATGAGACTGGCAGCAGCAGATATAGGTATCATCTACTTTTTGTTTAGTATGTTTCTTTATTCGAGTTTCTTCATGCTCAAATTCGTCATCCGTTTGCCTACTCGTTTTGTTAACATGACTTGACCTACATTACAAACTACGTCATGTCGAATTTTGTGTCTGTGAGcacttttataactgaattaatgGAAGTGAGATTACACTTTTGTTTATGTTGGAACATCAATCGATTCGCAACTATACTGACATGTAGCTTTCAAGAACTGATTGTTCacattttaaaatctctaaaattaaCTTGTGTCATGCTTAGAGTTGTAAACTTACGGAGTTAAAATTGAACTACTGGATATGTTAAGATAGATTTCAGCTGAAAATTTGGTATATGCATAGTAATTGTGAAAAAGAAGGGAAATTTCTTGTTTTGTGACCATACATTACTCTACAGGTTTAGCAAATTCAAGCCAATTTCATAAGAAAAGTAAAGCAACCATAACCATAGTGCTTTGTATAACCTTGGGGATGTTGATACTAATAGGTATTGTTCTTTCTGCATGGAGAACGAGGAGGAGGACTGGAGGTACTGTGCCCATTATTAATTAGCTTTGAACCTATTAACTTGAACGTACTTCTAACATTAATATACTTATCACACGAAGTATGTATAGGCAATACGTTAACTGATGAAGGCGCAGATGAAATGGAGCTACCACTTTTTGATCTAGAAACCATAGCTGAGGCAACATATAATTTTTCCGACAATAATAAACTTGGAGAAGGTGGATTCGGTCCTGTTTACAAGGTAAGATTTTAACATGATTCAGTTATGTTATTCAAATTCTTCAACCCTTGGTAATATAAACAATATTTCCTATGGTGTTGTTATTGAATTTCTTGTAGACTCATGTCTAAgataggtgaaagtaatatatgTGAAGTGATATAGGGTACTGCAACTTCCAATTCCTTGGTTGGCATGAATATTATTATTTCTGCATCATCCCTATCATTGTCGTCCTCAATATTAGAAACTTTTGAATGTCTTGTCGTATGATTTTAGTTATTTGCCATAGTTAGCCTTTGTAATGCTTAACCAGACATCTTTGTTTGATTCAGTTCTTGTAGTTTAATTTCTATATGTATGTTTGATTCGATTTACATATTAGTTTGCATGTAGTTTCTCCTCTTCTGATGCAATGTGCCTTCTAAAAGAAAACACTTATATTTTGATGGTGGAATTTCAGGGAATACTAAGGGAGGGTCAAGAGATAGCTGTGAAGAGACTATCGAAGACTTCATCACAAGGTTTCGATGAACTAAAGACAGAAGTAGTATTAATAGCAAAGCTTCAACATCGTAATCTTGTGAGAATTCTAGGATGTTGCATCCAAGTAGATGAAagcatgttaatttatgaataCATGCCTAACAGAAGCTTAGATGCCTTCATCTTTGGTGCGCCCAAACCTCTTAAATTTTCTGTTtaattttcttctccttcttttttcaTTCATATATTATACATGAATGCAtgatttcctcttcttctttctccctttctttctttctttctttctttctttcttttattttattttattttagttcagtGGAAATCCTTTTCCTTTAGGACAACGACTCACAAGCCAGTTAGTTATCAGTGCAATAATCGCTATGAAAAAATGAAACTATAGCATGATTTCGAGGAAACACTTATTGATGTTCATGGCGATTGCTTTTACTGGCAGATAATAATTTTGAAGATCGGGTCAACATGGTTGGCTCGTTAATGGTTCGGAGTGCAAGTTCAAATATCACGAGTTGAACTGCGACCGTTGACACAAGCTGATCTTTGAATTTTGAACCAAGTTTCGAAGATCGGTATGTGATTAAATATGCATCTTCCAGCAACATTTTTGGCAACTTCAATGTAATTTAATTAGTTTTCtcataaataaaagaattacaaataaataaatgggttCGATATAGGGTTGAAGCTTTGTGATCAATGGATTAATCCGTTTGATCCGTAATTTCAATGGATTAATTTTTCATGAATAAAGACTAACAATTATTGGTAGAATCAAACTATATGCATATTTCATCTCAGTTTAATCTATCGCTACATCTATTAGTGTCCTTTGttttaatatacacatatatatttagcagatgaGGAAAAGGCCCTATTGTTAGACTGGGCATCGCGATATGATATCATCTTAGGAATAGCTAGAGGACTTCTTTACCTCCATCAAGATTCTAGGTTCCGCATAATTCATAGGGACCTCAAAGCTAGCAACATTCTTCTAGATAAAGACATGAAtcctaaaatttcagattttgggtTGGCCAGAATATTTGGAGAAGAGGAGACGAAAACTAAAACAGCAAGGGTAGTTGGCACATAGTAAGGCACTGACCATCATAACAATCTGACATTTTATCTTAATGTACTCAGCCAATAATATTGTTTCATCAACATGCAGTGGGTATATGGCACCAGAGTATGCGCTTAATGGGATAATTTCTGTAAAGAGTGATGTTTTTAGCTTTGGTGTTTTAGTTTTAGAAATTATAAGTGGAAAGCGAAATAAAGGAGTTTACTTATCTGAGGCTGAGGAATATCTTCTGGGCATAGTATGTCTATTCTGAATATGtgattgaatttgtttatttagttttgttATTTACTGTTACGTGCATGAATGTATGTATTCTTGATTTGGTAGGCATGGACTTTGTGGAGAGAAGGAAATGGCGTGCAGCTAGTAAGCTCATCTATTCAACATTCTATCTGCGTAGAAGAGGTTATAAGATGTATTAAAGTTGGACTCCTATGCATTCAAGAGAGACCCGAGGACAGGCCAACAATGTCATCtgtatggttgatgttaaatagtgaaaatacaaatacgcctcAGCCTCAACAACCTGCGTTTCTTCTTAGAAGAAACAGTCCTCGAGAAGCTGCCTCCTCATCTGTAAATGGTTTGACAATTACAATGGCTATAGGCAGataa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020272816.1	8.8e-257	receptor-like serine/threonine-protein kinase SD1-8 isoform X3
Swissprot	O81905.1	4.8e-191	S-domain-1 (SD1) receptor kinase 8
trEMBL	A0A5P1EIC1	2.1e-252	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	47.75	0.0	676	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa5G00187	AT4G21380.1	733	323	13	4	690	132	850	47.75	676
Asa5G00187	AT1G65800.1	702	313	12	4	668	130	817	48.15	640
Asa5G00187	AT1G65790.1	728	329	11	4	690	130	843	47.25	637

Ortholog group

Species	Genes
Allium cepa	g275833.t1; g90639.t1
Allium fistulosum	AfisC2G00008; AfisC2G00014
Allium sativum	Asa5G00182.1; Asa5G00187.1; Asa5G00189.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	2	57	51.0	1.1e-13
PF00954.17	S_locus_glycop	Domain	88	198	84.5	6.3e-24
PF08276.8	PAN_2	Domain	219	286	74.2	5.8e-21
PF07714.14	Pkinase_Tyr	Domain	381	645	164.3	2.8e-48

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network