Detail information of Asa5G00198


Location
GeneChrStartEndStrand
Asa5G00198chr55332799753341485+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008794265.10.0e+00ATP-dependent helicase BRM-like
SwissprotQ6EVK6.10.0e+00Protein CHROMATIN REMODELING 2
trEMBLA0A8B7C9650.0e+00ATP-dependent helicase BRM-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46020.264.340.01507ATBRM;BRM;CHA2;CHR2transcription regulatory protein SNF2, putative

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Ortholog group
SpeciesGenes
Allium cepag191145.t1
Allium fistulosumAfisC2G00132
Allium sativumAsa5G00198.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain17821128.86.8e-07
PF00176.20SNF2_NFamily648947207.12.8e-61
PF00271.28Helicase_CFamily971108061.86.3e-17
PF00439.22BromodomainDomain1418147822.00.00012

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11647SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4EC:3.6.4.- Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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