result

Gene information

Detail information of Asa5G00273

Location

Gene	Chr	Start	End	Strand
Asa5G00273	chr5	70776835	70778472	-

Sequences

CDS

>Asa5G00273.1
ATGTCCAACAATTCGCTTAGCGGTGAAATTCCAAGAAGTTTAACCCTACTGAAAAGCCTCAGTGTTGCACAAGGTTCTTCAAATGGTAGTTCAATTGTTATGCCTCTCTATGTCAAGCGAAACCAAAGTGTTCTTGGTCTTCAATACAATCAAGTATCAAGTTTCCCTCCCTCTTTATACTTGAACGATAATAATCTGAATGGATCTATATGGCCTGAATTTGGAAACTTAAAAGCTCTTCATGTCTTGGACTTAAGCCACAACAGAATTTCTGGAACTATTCCTGAGACTATTTCAAAAATGGAAAATTTAGAGGTTTTAGATCTTTCAGGCAACGAACTCAATGGTTCAATTCCTCTATCTTTAACCAAGCTCACTTTTTTATCCAGATTCAGTGTAGCCCACAATCACTTGGAAGGAGAAATTCCGACTGGTGGTCAATTCTTTACTTTCTCGAATTCATGTTTTGAAGGTAACTCCGGATTGTGTCGCTTTCCTAACAGGTGCAATAAAACATATCCAGCTGCTACAACATTTTCTTCACAAAGTGGTAGAGTTGGGAAGAGAAATATCATAGGTATAACCATTAGTATATGTGTTGGCATTGCTGTACTCTTGGTGGTTCTCTTAGTTAATTTATCGAGAAAAGACATGATCGAACCTACACAGGTAGTGGACATTGATGAAGAAACAGCTAACTGCCATTCTGCCGCCACTTCCAAGCTTGTAATCTTTTTTCAAAATCCGGAATCTAAAATAGAAATAACCATCAATGACCTATTGAAGTCTACAAACAACTTCGATCAATCAAATATAATTGGGTGTGGAGGATTTGGCCTAGTGTACAAAGCATGTTTACCCGATGGCACCAAAGCAGCCATCAAAAAGCTGTCTGGAGACTGTGGTCAAATGGAAAGAGAGTTTCAAGCAGAAGTAGAAGCATTATCAAGAGCGCAGCACAAAAATTTAGTCTCTTTGAAAGGTTATTGTCGCCATGGCAATGATAGACTTCTCATCTACTCCTACATGGAAAACGGAAGCTTAGACTATTGGCTGCATGAAAAGTCCGATAGTGGTTCATGCTTGTTATGGAATTCCAGACTCAAAATAGCTCAAGGATCAGCTAGAGGTCTAGCTTACTTGCACAAGGTCTGTGAACCTAACATCATACACAGAGACGTGAAATCTAGCAACATTTTACTTGATGAAAGGTTCGAAGCGCACTTAGCGGATTTTGGGCTTTCTAGACTGATTAGGCCATATGATACACATGTAACTACAGATTTGGTTGGGACTTTAGGGTATATACCTCCGGAGTATAGTCAGACCTTAAGTGCAACTACTAGAGGCGATGTGTACAGCTTTGGGGTCGTTCTTTTGGAGCTGTTGACAGGTAGGAGACCCGTGGATGTCTGTAAAGGAAGAGGGTGTAGGAATTTAGTGACATGGGTAGTTCAAATGAAGTCGGAAGGTAAAGAGGAGCTGGTTTTCGATGAGGGAATCGTGAGTAAAACTAACGGGAAGCAACTCATGGCTGTACTTGAGACTGCTTGTAGATGTGTTGCTTTAGATCCGAGACATAGGCCTACCATTGATCAAGTTGTTATGTGGCTTGATGTTGTTGGCGCTGATGGATGA

Protein

Gene

>Asa5G00273.1
ATGTCCAACAATTCGCTTAGCGGTGAAATTCCAAGAAGTTTAACCCTACTGAAAAGCCTCAGTGTTGCACAAGGTTCTTCAAATGGTAGTTCAATTGTTATGCCTCTCTATGTCAAGCGAAACCAAAGTGTTCTTGGTCTTCAATACAATCAAGTATCAAGTTTCCCTCCCTCTTTATACTTGAACGATAATAATCTGAATGGATCTATATGGCCTGAATTTGGAAACTTAAAAGCTCTTCATGTCTTGGACTTAAGCCACAACAGAATTTCTGGAACTATTCCTGAGACTATttcaaaaatggaaaatttagaggTTTTAGATCTTTCAGGCAACGAACTCAATGGTTCAATTCCTCTATCTTTAACCAAGCTCACTTTTTTATCCAGATTCAGTGTAGCCCACAATCACTTGGAAGGAGAAATTCCGACTGGTGGTCAATTCTTTACTTTCTCGAATTCATGTTTTGAAGGTAACTCCGGATTGTGTCGCTTTCCTAACAGGTGCAATAAAACATATCCAGCTGCTACAACATTTTCTTCACAAAGTGGTAGAGTTGGGAAGAGAAATATCATAGGTATAACCATTAGTATATGTGTTGGCATTGCTGTACTCTTGGTGGTTCTCTTAGTTAATTTATCGAGAAAAGACATGATCGAACCTACACAGGTAGTGGACATTGATGAAGAAACAGCTAACTGCCATTCTGCCGCCACTTCCAAGCTTGTAATCTTTTTTCAAAATCCGGAATCTAAAATAGAAATAACCATCAATGACCTATTGAAGTCTACAAACAACTTCGATCAATCAAATATAATTGGGTGTGGAGGATTTGGCCTAGTGTACAAAGCATGTTTACCCGATGGCACCAAAGCAGCCATCAAAAAGCTGTCTGGAGACTGTGGTCAAATGGAAAGAGAGTTTCAAGCAGAAGTAGAAGCATTATCAAGAGCGCAGCACAAAAATTTAGTCTCTTTGAAAGGTTATTGTCGCCATGGCAATGATAGACTTCTCATCTACTCCTACATGGAAAACGGAAGCTTAGACTATTGGCTGCATGAAAAGTCCGATAGTGGTTCATGCTTGTTATGGAATTCCAGACTCAAAATAGCTCAAGGATCAGCTAGAGGTCTAGCTTACTTGCACAAGGTCTGTGAACCTAACATCATACACAGAGACGTGAAATCTAGCAACATTTTACTTGATGAAAGGTTCGAAGCGCACTTAGCGGATTTTGGGCTTTCTAGACTGATTAGGCCATATGATACACATGTAACTACAGATTTGGTTGGGACTTTAGGGTATATACCTCCGGAGTATAGTCAGACCTTAAGTGCAACTACTAGAGGCGATGTGTACAGCTTTGGGGTCGTTCTTTTGGAGCTGTTGACAGGTAGGAGACCCGTGGATGTCTGTAAAGGAAGAGGGTGTAGGAATTTAGTGACATGGGTAGTTCAAATGAAGTCGGAAGGTAAAGAGGAGCTGGTTTTCGATGAGGGAATCGTGAGTAAAACTAACGGGAAGCAACTCATGGCTGTACTTGAGACTGCTTGTAGATGTGTTGCTTTAGATCCGAGACATAGGCCTACCATTGATCAAGTTGTTATGTGGCTTGATGTTGTTGGCGCTGATGGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK74924.1	1.1e-196	uncharacterized protein A4U43_C03F11510
Swissprot	Q9FN37.1	4.8e-154	Phytosulfokine LRR receptor kinase 2
trEMBL	A0A5P1FA03	7.6e-197	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G53890.1	62.73	0.0	690	AtPSKR2;PSKR2	phytosylfokine-alpha receptor 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G00273	AT5G53890.1	550	190	7	1	539	481	1026	62.73	0.0	690
Asa5G00273	AT5G53890.1	144	81	3	1	143	215	345	34.03	1e-10	65.1
Asa5G00273	AT5G53890.1	112	64	1	52	158	62	173	38.39	5e-09	59.7

Ortholog group

Species	Genes
Allium cepa	g345952.t1
Allium fistulosum	AfisC2G00528
Allium sativum	Asa5G00272.1; Asa5G00273.1
Arabidopsis thaliana	AT5G53890.1
Oryza sativa	LOC_Os07g01710.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	58	114	37.3	1.5e-09
PF00069.22	Pkinase	Domain	268	535	149.2	1.2e-43

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13415	BRI1; protein brassinosteroid insensitive 1	EC:2.7.10.1 2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network