Detail information of Asa5G00486


Location
GeneChrStartEndStrand
Asa5G00486chr5114667079114667867+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQBC36000.15.4e-57heat shock transcription factor B2b
SwissprotP22335.16.2e-42Heat stress transcription factor
trEMBLA0A411JIK53.9e-57Heat shock transcription factor B2b

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G62020.150.523e-50 195AT-HSFB2A;HSFB2Aheat shock transcription factor B2A

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag508518.t1
Allium fistulosumAfisC2G01168
Allium sativumAsa5G00486.1
Arabidopsis thalianaAT2G41690.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00447.14HSF_DNA-bindFamily695107.83e-31

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009408Presponse to heat
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09419HSFF; heat shock transcription factor, other eukaryoteEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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