Detail information of Asa5G00534


Location
GeneChrStartEndStrand
Asa5G00534chr5124019977124020587+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246624.11.0e-30auxin-responsive protein IAA25-like isoform X1
SwissprotP0C128.13.6e-25Indoleacetic acid-induced protein 25
trEMBLA0A5P1E5677.3e-31Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G16500.147.175e-23 102IAA26;PAP1phytochrome-associated protein 1

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Ortholog group
SpeciesGenes
Allium cepag51303.t1
Allium fistulosumAfisC2G08382; AfisS483G00001
Allium sativumAsa5G00533.1; Asa5G00534.1
Arabidopsis thaliana
Oryza sativaLOC_Os06g24850.1; LOC_Os08g01780.1; LOC_Os08g01780.2; LOC_Os11g11410.1; LOC_Os11g11410.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily399127.09.7e-37

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14484IAA; auxin-responsive protein IAAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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