Detail information of Asa5G00578
| Gene | Chr | Start | End | Strand |
|---|
| Asa5G00578 | chr5 | 131928006 | 131928941 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_009400502.1 | 5.3e-84 | PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like |
| Swissprot | Q9ZWM9.1 | 2.2e-79 | Protein RELATED TO ABI3/VP1 1 |
| trEMBL | A0A804J2R3 | 3.8e-84 | (wild Malaysian banana) hypothetical protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT1G68840.1 | 57.01 | 9e-86 | 313 | AtRAV2;EDF2;RAP2.8;RAV2;TEM2 | related to ABI3/VP1 2 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa5G00578 | AT1G68840.2 | 314 | 107 | 8 | 6 | 307 | 34 | 331 | 57.01 | 9e-86 | 313 |
| Asa5G00578 | AT1G68840.1 | 314 | 107 | 8 | 6 | 307 | 34 | 331 | 57.01 | 9e-86 | 313 |
| Asa5G00578 | AT3G25730.1 | 297 | 94 | 7 | 7 | 291 | 29 | 307 | 58.25 | 2e-84 | 309 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00847.17 | AP2 | Domain | 33 | 80 | 26.8 | 4.1e-06 |
| PF02362.18 | B3 | Family | 158 | 246 | 96.1 | 8.6e-28 |
| Accession | Ontology | Name |
|---|
| GO:0003677 | F | DNA binding
|
| GO:0003700 | F | transcription factor activity, sequence-specific DNA binding
|
| GO:0006355 | P | regulation of transcription, DNA-templated
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K09287 | RAV; RAV-like factor | EC:- | - | - |