Detail information of Asa5G00579


Location
GeneChrStartEndStrand
Asa5G00579chr5131985712131986050-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_006366067.12.3e-21PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1
SwissprotP82280.19.1e-23Protein TEMPRANILLO 2
trEMBLM1ABV41.7e-21RAV

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68840.155.861e-24 108AtRAV2;EDF2;RAP2.8;RAV2;TEM2related to ABI3/VP1 2

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Ortholog group
SpeciesGenes
Allium cepag285090.t1; g391845.t1
Allium fistulosumAfisC1G05461
Allium sativumAsa5G00579.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family25262.62.2e-17

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09287RAV; RAV-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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