result

Gene information

Detail information of Asa5G00985

Location

Gene	Chr	Start	End	Strand
Asa5G00985	chr5	220257135	220260815	+

Sequences

CDS

Protein

Gene

>Asa5G00985.1
ATGTCCACTTTCGCTTCAATCCGCATTTTCACATTCCTCCTCTTCTTTCTCAGCATTTACAATTCCTATGCGAACCCAGAACTTAAAGCTTTATTGGAGATCAAGTCATCATTAGACCCAACTGGCAAAATTCTATTCTCATGGCATATTGACGGAGATCAATGTAGTGGAAAATTTGATGGAGTCGCATGCAATGGTCATGGAAAAGTTGCAAATATTTCGTTGCAAGGAAAAGGTCTCGCTGGTCGTTTATCTCCTGCTATTTCTAAACTCAAATGCTTATCTGGGCTTTACCTTCATTACAATCAGATCAAAGGAGGAATACCAAAAGAAATTGCAAACTTGACTGAGTTGGTTGACTTGTATTTGAATGTTAACAGTTTGTCAGGAAGCATTCCATCTGAATTTGGAAACATGGATAGCCTTCAGGGTATgattttgttattttgttcatgtGATTTCTGCTTGTTTCAGTTGTTTATAAcagtaaagtttggatttttatgtatGTTACTGTGCATTTTTTTCGTGTAATTGATCTGTTGTACCTCAGCTGCTGAATTATAACTTGTATTTACTGGTTTTTAGCATTTTGTgaatattaaaatggtttgaacttaaaaaaaaaagttcaaatctTGCTATGTGAAacttttaaagatttcaactttatgACTGATTCTGTGTGGctactttcttttatttattttatttatttattttttaggttTCAGGATATGTAAtcattctatatatttataaactgtAGTATAATGTATTTTTGCCTTGTATACAGTTCTTCAGCTTTGCTACAATCAGCTTACTGGAAGCATACCAACCCAACTTGGCCTTCTAAAAAATTTAAGTGTTCTGGCTTTGCAATCAAACAATCTTCATGGAGCTATACCTGCAAGTTTAGGGGATTTAACTCAACTAACAAGACTAGATTTGAGTTTCAACAAGCTCTTTGGTTCAATTCCTACAAAGTTAGCTGAACTTCCTCAGCTTCAAGTATTAGATCTTCGGAATAATTCTCTTTCTGGCAATGTTCCTTCAGGTAAAACCATTTGTTTGCTgttttcatacatataataaaactcTTCTATTACCTTATTCGTTGTATTTTCTTCAAATTTGCTATTTTTCACTTGGTAactatttgtctatttattttaatactgtGCATAAAGTTATCATATCTTAGAGTGTGTTTGATAATAACTCataaaaagtagaaaaaaaataaaaaaaaagagtaaaaagaaAGTAGCTTATGGGTTACTTTTGTAATTTGAAGCGGTTgacaaaaacataattttttgaatcaaaagaAACAAATAAGCTGATAagctggaagaaaaaaaaaatttgtttatggCTTAACTTAAAATTTTCTGACTACGTTTGGTCATAATTTCAACTTGTCTAACCAAACACTTGTATTATTAATATTTACCCGTTACTCAAAATTACAAAGTTACAACTCAGAACTCCTTTTAAGGAAATTCAAATATCTGAAAATAATGGGATTTGTTTGCCTTGTAGAACTTAAGCTACTAAACGAAGGATTCCAATTTGGCAACAATACTAATCTATGTGGGGTAGAATTCTCTTCCCTTCGTACATGTACAACATCAGATCTCTTAAGCTCGAACAGGCCCGAACCAACCAACCATGACCCAAAAGTTTCAAGCCCTGACTACCAAATTCCTCTAGAAATTCCTAAATCAGCCAATGTCACTACTGCACATTGCAGCACCACAAActgttccagtaactcaaaatccTCTACCCTAATCATCACTGTAGGGGTCATCGCAGTTTTAGTTTCAGGTGGTATTTCAGGCCTATTATCCTTCGCATGGTACCGCCGTAAAAAGCAAAAGATCGGCAATGGCAGCTCTCAAGATACAATGGATAACCACCGCATAAGCATCGATCGCTCAAAGGATCTTCCATTAAAACCTGCTTCTCCACTCATTAGTATCGAATACTCTAATGGGTGGGACCCGTTAGCCTCTCTTGAGGCTACACAAAGCTTTAGGTACAATGTGGAGGAGGTGGAGAGTGCTACTCAATACTTTTCGGAGGTTAACTTGCTTGGAAAGAGCGGCTTTGCAAGTACTTATAAAGGGCGGTTGAGGGATGGTAGTGAGGTTGCAGTTAAGAGTATTAGCAAGTCGAGTTGCAAATCGGAAGAGGTGGATTTTTTGAAAGGTCTGAAATTGTTAACGGTCATTAGGCATGAAAATGTGGTGGGATTGAAAGGCTTTTGTTGTTCGAGGGGAAGAGGAGAATGCTATCTTGTTTATGATTTCGTTGCTAACGGGAGCTTGTTGCATTATTTGGATGTGAAGGGTACTGATGTGAGTAAGGTGCTTGATTGGCCCGTTAGGGTTTCGATCATCAAGGGCATTGCGAAAGGTATCAAAACTTCAAGTTTTCTGAATTTTGGAACTTTCTCTAAAAATTTAAGTATCAATTTTATGCATGTATTGTAAACCGTTCATGAGTATGTGCGGTACAGCAACACAAAACATTACATGGATCAAGGGTGTTATGCATGTGCCCTTTAACTGTTCAAACTCATTTTCTTGACTATTCATCACTAGTAATTATGATATAATATGGTTGTTTTGTTtaaaagtttgaattcgattttggcATATACATCAGTCgagttaaaattattttttaatgtttaagCACCAAACTGGGCCAGTCATTGTCTTTAGTTTTTTACCACAAATTTATCAAGAAAAATTGACTGCTAGTTTCAAACAATTAGAATTGATTCTCATTCTTGCTGAATCTGAAATGATTTATGTATATTCTTCATAAAGTCGTTGAggatatatatttgattttggCATACATCCACTTGAGTCAAATGTCCATGTGCTTGTGGTTTTTGacttttcttgtttcatttttcagCTTTGATGTTCAACCAACTGGCATATGAATACAATTTGAAGAGTCAATGTCCACTAATAAGTGCTTAAAGTCATTATACAATGATCACAATAAGTGATATTTacctaattataattatttaacagTACACAAATTTTTTAGTGCTTCTTTAAACTTTTAACGCTTATTATGCCATAGAAAACATCCAATAAGCGTAATTCTGGTTGAAAACAAGCACGCTTAAAGCTAATCAACATTCGtcaaatagagtttaaatatttcCAAACTTTTCTTTCAGGTATCAATTATTTACACGAAAACAGAACTCACAAACCACCTCTAGTCCACCAAAACCTATCCTCTGAAAAAATACTCATTGACCAAAACTTTGCCCCTAAAATATCCGGGCCTGGCCTGAACAAGCTCTTAGCAGATGATGTAGTTTTCTCATCTTTAAAAGGAAGTGCAGCAATGGGTTATTTAGCTCCTGAATACACTACTACTGGAAGATTCACTGATAAAAGCGATGTGTACGCATTTGGAGTCATCATGTTCCAAATTCTCACAGGCAAAACTCGTGTCACGCACATGAGACAAAGTGCTGAATCCGGCAAGCTCGAAGACCTCGTTGATGAAAACCTTAATGGGAAGTACAACAAGTTAGAAGCTGCTAGAGTTGCAAGTGTTGCATTGGTTTGTACTAGTGAAGTTCCCAGTCAGAGGCCTCGAATGGAGGCTGTGGTTAAGGAGTTAAGCATCTTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273743.1	7.0e-174	LRR receptor-like serine/threonine-protein kinase GSO2
Swissprot	Q9LK03.3	2.6e-48	Somatic embryogenesis receptor kinase-like protein
trEMBL	A0A1D1Z4P6	7.3e-165	Protein NSP-INTERACTING KINASE 2 (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G51560.1	55.54	0.0	719		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa5G00985	AT5G51560.1	659	267	10	27	675	31	673	55.54	719
Asa5G00985	AT2G45340.1	667	257	13	31	676	30	685	56.67	716
Asa5G00985	AT4G22730.1	692	312	9	1	676	1	683	51.30	692

Ortholog group

Species	Genes
Allium cepa	g407021.t1; g485068.t1
Allium fistulosum	AfisC2G01237; AfisC2G05770
Allium sativum	Asa5G00985.1; Asa5G00990.1; Asa6G03134.1
Arabidopsis thaliana	AT5G51560.1
Oryza sativa	LOC_Os01g39600.1; LOC_Os06g04370.1; LOC_Os08g02440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	24	65	26.7	4.7e-06
PF13855.3	LRR_8	Repeat	165	224	34.2	1.4e-08
PF07714.14	Pkinase_Tyr	Domain	414	675	138.8	1.7e-40

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network