result

Gene information

Detail information of Asa5G01072

Location

Gene	Chr	Start	End	Strand
Asa5G01072	chr5	248897788	248901842	-

Sequences

CDS

Protein

Gene

>Asa5G01072.1
GTTTACATCTTTTCAACTTTGAAATCTCTGAAGTTGTTTTTGCCCCCTTGTCAGCTTCCGGTTTATCTGCTGTTGGCTTGTTGACTATGCCACTCCGGAAAAGAAAGCCTTTTGCATTATTAAAACCTCCTGAAGATTTAAAGCCAGATGTGATCGTTTATAAAATCCCGTTTACAGAGGAGATAATACTAGACCATCAGTATCCTTTAttgtcattttttttaatcttcatttttaagagtttttatttttaattcttaccGAAAAGGTTGCATTTAAGTTTGAATGATGAATTGTGTTTTTGTTCGTTATCCTTAATATTGTGTAGAGAATACTTGAACAGATTAAACCTCTACAATCAAAGTGTTTGGACCTGTGAGGTCACAGGTAAAACTAAGTTAACTTATGAAGAGGCTTTGAAATCTGAAAAAGTTGCTAGAGAGAAAGTCCAACACTTCCCTGAAGAACTAATGGCTCCAGTGCTTAGTAAAATCCAATTCAGTAAGGGCTCTAAAATACATCATATTAATATCCATATTTTTGCAATATTGCATTTATGCTGTGTTTCTGGAGCTTTGCCTCTTGTTCTTGTATCATCAACTACACCATGACCAGAAAACAGTTGAAATTTGCTAATATTTTTTCCAATATAACTGATTTGGTTATTATTCCATTAGGAACTATTCCATCATATGTGCATATCTGTTAATGCAATTTTCAAATTACATGTTTCAGGACTGTTTCAAGTATGGTTTGCTGCTTCACCCTTTATAGGCCTAAGGCTTATTTCAAATTACATGTTCCCACTTCCAAAATTTTTAACCTGTTCTCCATGAATTGTGAATCATgagtagcaaaaaaaaaaaaaaaaagtacaataACAATGATAACGATAATTGGTCAAAATGACATCATGATGCTATTTTGCTGAATTTATTGTGAAATTTGTAGTCCATATTTTTTCTTCTGTGCATGCTCGATATTTTTTAAGTTATGCTAGGAGGCCCGAAAATACGTCAGGGAAGTCAGGCTTGACCCATAAATTTTAGGAGAAAAAGATGGAATATAAAGGGTCCCATTACCTTTTATATCCAGCAATTTTCCACAATTTGTTTCTGGCCTTGTAggatttctaatatttctatttccgcATGATTGGAATGATTCAACTCAACTGCAGCAACATGTTATAATCTTGACAATGTATTTAGCAACTATCGACTTCTGGCCATTATTTTAGTGAAGATTCATCCAACGTAGTTGCAAGCATGATGTTTTTCAAATTGGTTTTGCAAATTGTACCCGTTAACtttaatattttatgatttatagGTACTCTAAGTTTGACAGATCTCGTAGAGTCAATGTATAAAATGCTGCAAGAACAGTTCTTTGAAGGTTCAGAAGTCGAAGGGAAGAGGGAGCAATCAGTAGAGGCTTGCAAAATATTAAAGATTATAAAAGATGAAAACTGCATCAAATATAAAGTTGGCTGGCTTGATAAGGATAAATTCGTGACTGAAACTGCAGAGCTCTTGCCTGAAGATCTGATTCTTAAAAAAGCACCTTGCAGTAGGGGATTATTGAAGGCATTCATTAACATGTCAACCTCTCAGAATCATCCATGGCTGATCCATGGGAATCTTGCTAAGAAATATGGAATCCCAGAGGAAATTCCTCATGGCTTAACTGACATATCCGAGGAAGGCAGAAAGGTACTCCtttatcctaattttatttcttttcttctgataatagattttttttttttttttccttcccccTTTTGTATGTTAGTTATCATACACAGCTGATTTATTTTTTATCCCAGTAATTGTTCGCCATTGGTATTGCTCAATCAGGTTGATAgatattaatattattgttagttgCAATGCAATACCACCTATAAATAACACCATAGTATCAATTACCTGTCACTTGTCAGCAGCATTTTGCAGGACAAACAAAAATAATAGATTTAACAGTGTGCTCAAGGTGCAAACCGAGACTTAAAAACCAGTACAACTCTAATGCAGATGTATTCTGTTACTTGTTAATTGGTCATCCACGCACTGTTCTAAATTTACATTGTGTTTAGAATTGAGGCGGTCTGTTGATATGAATGAAATATGTGTTTAACTTGATTGATAGTTTGAAGAGCATAGGTACAAAATTGCCATTGATGTCCGATGCAAGTAATTTATTTACCAGCGTCTTTATATCCCACGCTTTTTTTacctatataatatcttttaacAACAGGGCAACAAGAAACGAAAAGGTATCGATAATGGAGACATGAACTCGTCAAAGCGTACCAAATACCCCATTGATGATCTTTTGGTTCTTCCTGATCGTACATTTCCAATTCGGCCTGTTCTATGCAATGATTTTAAGGTACCAATTGAATGTGCTGGAAATCTCATAATGGTTTGGGATTTCTGCACCACTTTCAGCAAATTGCTCAGTTTGTCTAGATTTTCTCTTGAAGATTTTGAAAGTGCAATTTGCCACAAAGATAATAGCAATATTGTTCTAATAGTGGAGTCGCATGCTGCAATCCTTCGTTTGCTTATCAAGGAAGAGGGTGACTATTTCTTTGTGGTGCAAGATAAAAAAGCAAAACAAAaggtaaaattaacattttaattttgtCAGCTAAAATTCCAGGGAACTTGACCCTTCATTTTATTTCAGATCACTCTAGTCAACTGGATGGACTTTCTATGTGATTTTTTGGAGATGGAAGGTAGAGAACGATTCTCAAATTACCTGAAAACTGTAAGGAAAGGGCATTATTCTCTTCTTGATGTCAATGTCAAACTTGACATATATCAAGAACTTATTAATGAGGCAGTTAACAGCAATGCTGTTAGACGTAGAATAGGAGAGTGCGTAGAGGGACAAAAGCTTATTCGAAAAGAATATTACAGAAAAAATCAAAAATACAAGCTAGCAGCAAAAGAAGCAACAGATATTCAAAATGGGTACAGGACTTGTTTTCCTGTAATTATATCAAAGTAGTATTTAGTTTATTAACAAGATGTGAAATAATACGTCTTTTTTCTCAGATCAAAAACGGGAAACAGACACTCTGAGTCTTCTAAGATGGAAAGTATGGATAACCATACTGAGGAAAATCCGGTAAACATCTCATTTTGTGAACCTACACATATGTGTATGCATGtacattgatattttaaatattttaaacccTGCAACTGCTATGCTAAATAACAAGTTTAATATGCCTCAGAGGGATAATGTTGAGAAGGAATTGGACAAACTATCCGTGAAGACGAACCCTTTAGGAATGGATCGAAATTATAACCGATACTGGTTTTTCAAACATGAACGAAGACTGTTTATCGAGACCTCGGAGGGAAATGCTTTTGGCTACTACAGAACTAAGGAGGAGGTGAACATTAGTTAACAAATGAACTCACTTGGTTGTGTTTTATAATTTTCCTTGGTTAACTTCTCTATTTATTCACATCAATCAGTTTGATGCACTGATAAGCTCGCTGAATCCCAAAGGCATGAGGGAGAGAGCTCTGAAGAAGCAGCTTGAGAAGAACTACTACAGGATAAGGTATGTCTTCCATCTCCTTTCTTCCTtgttcatgtatatttttttaacaCTTACAAGGAGAAGCGGGTGTTGTCATTTACATGAccaacttaaccaacatgtcaaAACAGTCAAACTGAAAGAAGTTAAAATTCCatcaatatatttttgaatatgtatgtatgtatgtgtatgtgtgtgtgtttgtgtgtgtatatgtatatataaagccAACCAGTTTGGCATTGGTTCTTAAACGAGCTTGACAACATTTTATTGAAAGTTTGAAACTGATGTATGTTGTTGTCTAaatatagtgttttttttttttggcagaaaTGCTTTACAGCAGGAATCAAAAGTAGATGGTCGAAATGACTTATCAGACGAAGGTCAACTTAGGCGTTCTGCTCGTAAACGTACGCCCACTCGATCAAAGCCAGCGTTTTTAGCTTATGTCAACCTGTTGAAAGAAGACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020111993.1	1.4e-160	DDT domain-containing protein DDB_G0282237 isoform X1
Swissprot	Q9NRL2.2	6.7e-19	hWALp1
trEMBL	A0A6P5H283	9.9e-161	DDT domain-containing protein DDB_G0282237 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G08630.1	46.36	3e-101	366		DDT domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G01072	AT5G08630.1	440	209	6	29	442	1	439	46.36	3e-101	366
Asa5G01072	AT5G08630.1	134	67	1	482	613	590	723	48.51	6e-28	122

Ortholog group

Species	Genes
Allium cepa	g514044.t1
Allium fistulosum	AfisC2G01550
Allium sativum	Asa5G01072.1
Arabidopsis thaliana	AT5G08630.1
Oryza sativa	LOC_Os02g35100.1; LOC_Os02g35100.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF10537.6	WAC_Acf1_DNA_bd	Domain	52	149	108.6	1.7e-31
PF02791.14	DDT	Family	300	357	57.0	1.6e-15
PF15613.3	WSD	Family	496	561	66.1	2.9e-18

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11655	BAZ1A, ACF1; bromodomain adjacent to zinc finger domain protein 1A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network