result

Gene information

Detail information of Asa5G01327

Location

Gene	Chr	Start	End	Strand
Asa5G01327	chr5	317443781	317446207	-

Sequences

CDS

Protein

Gene

>Asa5G01327.1
ATGTCAGGTCAAATGAGGCAACTGGTTTGGATAGGAAATGCTACAGGTTGGGTTCTGTTTTGGTCTCAACCTGTAAATCAACTTGACGTTTATGCTTTTTGTGGACCTTTCGGTAGTGGCAACAACGATGCTTTACCATTCTGCAGGTGTATAACTGGATTTGAACCAACATCGATTGATGAATGGCTACAGAGTGATTACTCACATGGTTGTAAGAGAAAGAGTCAGCTGCAATGTGGTTTTAATAGAAGCCATTTAGAAGAAGACGGGTATCTTCTAATGGATGGCATTAGGTTGCCTGATAACCCACTAAGGTTAATCGTCGATGATATTTCAGATTGCAAGAACTATTGTTTGAGCAATTGCTCGTGTAACGCTTACGACACATCTGAGAATTCAAGCTGCTCCTTTTGGATCGGAGATTTGCTTAATCTTCAAGATCAGTATGCCTCTAACATGTCAGGCAGTGGAAATTTCTTCCTCCGTCTCGCGGCATCAGATCTTGCTGATCCTAATACAAAAAAGTGTACATTTCTATACTACCTGTAATAAAATGTTCTGCCCCTTTTGGGTGCCACAGTTTTTTATACCTTGATACTCGGCTAACATGACTGTAACTCACAGCTAAGAAGGCAACGGTAATAATCATTGTGTGCATTGCTGGTGGAATGCTTGTATTAGCTTGTGTGGTGTGTTTTTTAtggaaaatgaagaaaataattagaagaataaaaataaaaggtacAATGTATCCTTATGACATTTTTCATGATTTACACACACACAACTCACACACACATGCACAATATGATAACAATAACATGGTCAATGCAGTTACCTTAGAAGCAGCTTCTGGCCGGTTCAATGAACATTCAAGTAATGAGCAAAGAGAAGACAACATCGACCTTGCTTTGTTTGAAGTTAGTACCATTGTTACCGCTACAAATTACTTCTCTGCAGCTAACAAGCTTGGAGTAGGAGGATTTGGACCAGTGTACAAggtaaatattatttttgacatgctTCATAATATTGCTGGAAAATGTGAAATCTAGTTCTTTAGGGAATTCTTGGACCTGATCAAGAGATAGCTGTGAAGAGACTCTCCAAGACGTCAACACAAGGAGTGGAAGAGTTCAAAAATGAGGTTAAGCTTATTGCTAAACTTCAGCATAGAAATCTTGTTCGGCTTCTGGGTTGCTGCATTCATGGAGAAGAGAGGATGTTAATATACGAGTACATGCCAAACAAAAGTTTAGATGCTTTTCTTTTTGGTACGTTCCGGCATGAATCTAGCATATACATGCACAGTACAAATGTTCATTCCTACTGTATTTTGACTCAAACTAGCTAGACTTAGCTGGATAAATACaagatttttttcctttcaaaataatgatgatgatgacaaATTGCATGAGTATAAATTCAGATATTCTACACATGGCCAATTTTTCATGTGGTACAAGTGGAAATATATATGAGAGTATCTCGAACTCAGTTTGTAGTTGTTGCTCAATAATGTCTGAAAATGTTACTaatttcaattttggaaaaagaaattgaagcaCATGAACTACATATTCAGTGCAAATTTATCCATATTGATTGTATGTTAATTTTATCAAACCAATGGCCACTAGTACAGTTGTAAATCTCTAAATTGTTGACTGGGACCAATTTTTATTGACAACATTAACCAAGGTTCGAAAcaataataaaatcaaacaaactaTTAATCAATACAAGTCAATCATGGTCTACAAACTGAAATATATGGATCATACAGTCATTTGATTATAGCTTCTTTGGCCTCATACAGTTGCAAAGCATCATCTACTGACTACAACCTTTGATTTTCCGCAATTCCAGAGAAAAAAGGTGCATTGCTTGATTGGAAGACTAGATGCCAGATTATTACAGGGGTAACTCGTGGGCTTGTCTATCTTCATCATGACTCCAGATTAAGAGTCATCCATAGAGATCTCAAAGTTAGCAATATTCttcttgataaaaatatgaatCCAAAAATATCCGACTTCGGACTGGCTAGAATCTTAACTGGAGAAGAGACGACCGACCTGAACACAAGAAAAGTAGTCGGTACATAGTAAGTTCAAACTTAACAAGTATTTACAACTTCACCTTTTGATGCATTGGTGATAATTGCAGTGGCTATATGTCTCCTGAATACGCCATGGAGGGTATTTTCTCCTGTGAAGTCGGACGTATTCAGCTTTGGGGTTTTATTACTCGAAATCATAAGCGGCAGAAAGAACAGAGGAAAATATACTCACTCGACGCATCTGAACCTTGTAGCTCACGTAAGTAGGAGTTTGCAGTCAGCTCAGCTGCGTTAAATTTGAAGCAAAACTTCACACTTTTGGTGTTTCTATTTTGGTTGTAGGCATGGAGTTTATGGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256477.1	1.9e-117	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	O81905.1	8.9e-104	S-domain-1 (SD1) receptor kinase 8
trEMBL	A0A6J0PNE5	1.4e-114	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	46.78	2e-106	382	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G01327	AT4G21380.1	451	208	10	2	434	270	706	46.78	2e-106	382
Asa5G01327	AT4G21390.1	460	200	12	2	436	273	711	46.52	2e-104	376
Asa5G01327	AT1G11330.1	443	210	8	3	434	273	702	47.18	2e-104	376

Ortholog group

Species	Genes
Allium cepa	g320304.t1; g320305.t1
Allium fistulosum	AfisC1G05772; AfisC2G09354; AfisC2G09355; AfisC4G01489; AfisC8G03836; AfisC8G04049
Allium sativum	Asa5G01327.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g57480.1; LOC_Os07g36544.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00954.17	S_locus_glycop	Domain	2	57	54.5	1.3e-14
PF08276.8	PAN_2	Domain	87	144	48.3	7.1e-13
PF00069.22	Pkinase	Domain	256	427	134.1	5e-39

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network