result

Gene information

Detail information of Asa5G01568

Location

Gene	Chr	Start	End	Strand
Asa5G01568	chr5	392714752	392716482	-

Sequences

CDS

>Asa5G01568.1
ATGTCAAGAGAACATAATAGTAATGCTATGCTACCAAATATTTCAAAGAATTTTCATTGCTCGAACTCTATAGATTTAGCTTCAGGACAAGCAAATGCAACGTCTTTTAGCCTAGATATGAGAACTCCAGAGCATTCGAATTATTTTCATAATTTGAAGTATTTGAAGGTAGCTCAACAACTGCTTGATGAACTTGTTAATGTTAAGAGTTGTCACAAGAAAAGGAAGGATGCCAGTAAAGGATCCAATCATGAGGCTAAGGAATTGTACAGTACTCAAGATTATATGAACAATTCTTCTAATGAGATATCAGTATTGGAGAAGCAAGAGCTACAGCGTACAGTGGAGAAGCTACTGACCATGGTTGATCAGCTTGAGCAAAGATACAAGCAATATAGAAATCAACTACATACAATCAGCATGTCATTTGATGCACTAACTAGACCACAGTCGTCTAAACCATACACAACACTAGCACTTCAAACAATTTCTAGCCAATTTCGATGCTTGAAAGATGCAATCACATCTCAAATAAGTAGCATTCGGAGAAAGCTAGGAGAACAAGTCATGAGTCCAAGTGAAAAAGGAGTGGGGATTTCTCGCCTTCGCTACATAGATCAGAAAATAAGGCAAGAAAGAATATTGCAGCAGTTTGGTTTGATGCACTCAAATGTATGGAGGCCACAAAGGGGACTGCCAGAAAATTCAGTTTCAGTTCTTCGTGCTTGGTTGTTTGAGCATTTTCTGCATCCTTACCCAAAAGACTCTGAGAAGCTAATGCTCGCAAAGCAAACAGGATTAACAAGAGGGCAGGTGGCGAATTGGTTCATAAACGCAAGAGTTCGTCTGTGGAAGCCAATGATCGAAGAGATGTACCAAGAAGAGATTGGTGAAGCTGAAAACCAATCAGACTCAACCTCGGACAAACTACCAAAACTTCTTGAAGAATTAAAATGCAACAAAGAGAGTGAAGAGGAGTGCAAATCAGATTCAAGGGCAAATGTGAACTTTAGTGCAGAAGATGGATACGTGAATATTAAATTGGGTGAGCAGATGCCTCACATTGAACAGAATGTCTGTAGTGTGTACGAAAATGAAAGGCTGGTGGTTCCTTATCAAACGGCTGAAATGAGTAGGTTTGGAAATGGAGTTTCTCTGACTTTAGGACTGCAAAACTGTGACGGTGGTCCTTCAGAATTTGGAGGAAGAATTTGA

Protein

Gene

>Asa5G01568.1
ATGTCAAGAGAACATAATAGTAATGCTATGCTACcaaatatttcaaagaattttcatTGCTCGAACTCTATAGATTTAGCTTCAGGACAAGCAAATGCAACGTCTTTTAGCCTAGATATGAGAACTCCAGAGCATTCGAATTATTTTCATAATTTGAAGTATTTGAAGGTAGCTCAACAACTGCTTGATGAACTTGTTAATGTTAAGAGTTGTCACAAGAAAAGGAAGGATGCCAGTAAAGGATCCAATCATGAGGCTAAGGAATTGTACAGTACTCAAGATTATATGAACAATTCTTCTAATGAGATATCAGTATTGGAGAAGCAAGAGCTACAGCGTACAGTGGAGAAGCTACTGACCATGGTTGATCAGGTGCATGTTCCTAAAATCAAAAgataattgtttcttttctttctgttATAACACAAACTCTTGATGTTATTACTTATTATAAAACAAAGATGTTAAAACCATCCAATCACCATTTATGTATAGTTCTGCATTTTTCGGTAATTTATCACAAACAACTTTCTGTAATTATAGTTaatgctgaattttgaatttaagtagCATTTCAAAGTAagtattttaatttggaaaataaaattgtgcagcttGAGCAAAGATACAAGCAATATAGAAATCAACTACATACAATCAGCATGTCATTTGATGCACTAACTAGACCACAGTCGTCTAAACCATACACAACACTAGCACTTCAAACAATTTCTAGCCAATTTCGATGCTTGAAAGATGCAATCACATCTCAAATAAGTAGCATTCGGAGAAAGCTAGGAGAACAAGTCATGAGTCCAAGTGAAAAAGGAGTGGGGATTTCTCGCCTTCGCTACATAGATCAGAAAATAAGGCAAGAAAGAATATTGCAGCAGTTTGGTTTGATGCACTCAAATGTATGGAGGCCACAAAGGGGACTGCCAGAAAATTCAGTTTCAGTTCTTCGTGCTTGGTTGTTTGAGCATTTTCTGCATCCGTGAgtagtttaaatttgaaataattctcAGTTTTTTATTTTTCTAGCATTTCCTAAAAgctttttattttatagtaattccatgatttatgctgtgtatttcttttttttttttaagttaccCAAAAGACTCTGAGAAGCTAATGCTCGCAAAGCAAACAGGATTAACAAGAGGGCAGGTACAAATTTTTTTCCTCTTAATTTTATACCTTTTTTCTTTGTATGAAGGAAAATATTCTACACTACTAAACACAATTACAACAATCCATGACATCCTTTTCTCTCAAAATGCTTTACAATGAAATACTTAGTTAAATCCATGTTTCATAACCAAGGTGGCGAATTGGTTCATAAACGCAAGAGTTCGTCTGTGGAAGCCAATGATCGAAGAGATGTACCAAGAAGAGATTGGTGAAGCTGAAAACCAATCAGACTCAACCTCGGACAAACTACCAAAACTTCTTGAAGAATTAAAATGCAACAAAGAGAGTGAAGAGGAGTGCAAATCAGATTCAAGGGCAAATGTGAACTTTAGTGCAGAAGATGGATACGTGAATATTAAATTGGGTGAGCAGATGCCTCACATTGAACAGAATGTCTGTAGTGTGTACGAAAATGAAAGGCTGGTGGTTCCTTATCAAACGGCTGAAATGAGTAGGTTTGGAAATGGAGTTTCTCTGACTTTAGGACTGCAAAACTGTGACGGTGGTCCTTCAGAATTTGGAGGAAGAATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010932911.1	1.7e-90	BEL1-like homeodomain protein 7
Swissprot	Q9SIW1.1	5.5e-78	BEL1-like homeodomain protein 7
trEMBL	A0A6I9S3U4	1.2e-90	BEL1-like homeodomain protein 7

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G34610.1	50.14	6e-87	318	BLH6	BEL1-like homeodomain 6

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G01568	AT4G34610.2	351	155	8	51	395	143	479	50.14	6e-87	318
Asa5G01568	AT4G34610.1	351	155	8	51	395	143	479	50.14	6e-87	318
Asa5G01568	AT2G16400.1	350	151	8	49	395	115	437	48.29	1e-86	316

Ortholog group

Species	Genes
Allium cepa	g346693.t1; g361908.t1; g388053.t1
Allium fistulosum	AfisC1G02541; AfisC5G04747; AfisC8G03523
Allium sativum	Asa5G01568.1; Asa7G02433.1
Arabidopsis thaliana	AT2G16400.1
Oryza sativa	LOC_Os03g06930.1; LOC_Os03g47740.1; LOC_Os03g47740.2; LOC_Os03g47740.3; LOC_Os12g43950.1; LOC_Os12g43950.2; LOC_Os12g43950.3; LOC_Os12g43950.4

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07526.8	POX	Domain	52	175	120.9	5.1e-35
PF05920.8	Homeobox_KN	Family	243	282	60.8	7.6e-17

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16670	MEIS2; homeobox protein Meis2	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network