Detail information of Asa5G01615


Location
GeneChrStartEndStrand
Asa5G01615chr5410663519410664332-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008777977.17.6e-58NAC domain-containing protein 83-like
SwissprotQ9FY93.13.1e-48Protein VND-INTERACTING 2
trEMBLA0A7I8KGW01.4e-58NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G13180.157.962e-49 192ANAC083;NAC083;VNI2NAC domain containing protein 83

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag41435.t1; g440985.t1
Allium fistulosumAfisC2G01886; AfisC2G08475; AfisC6G02507
Allium sativumAsa5G01615.1; Asa6G00927.1; Asa8G04229.1
Arabidopsis thalianaAT2G33480.1; AT2G33480.2; AT5G13180.1
Oryza sativaLOC_Os12g29330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily713192.61.9e-26

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.