Detail information of Asa5G01696


Location
GeneChrStartEndStrand
Asa5G01696chr5426236060426236285-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020595421.11.6e-10zinc finger CCCH domain-containing protein 12-like
SwissprotQ84W91.25.9e-10Zinc finger CCCH domain-containing protein ZFN-like 1
trEMBLD6MKI62.7e-12Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47850.266.671e-1164.7Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag537041.t1
Allium fistulosumAfisC2G03567; AfisC8G00934
Allium sativumAsa5G01696.1; Asa6G01402.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily295431.51e-07

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08852ERN1; serine/threonine-protein kinase/endoribonuclease IRE1EC:2.7.11.1 3.1.26.- Protein processing in endoplasmic reticulumko04141
Autophagy - animalko04140
Apoptosisko04210

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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