Detail information of Asa5G01918


Location
GeneChrStartEndStrand
Asa5G01918chr5489164810489173351+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244212.11.8e-108E2F transcription factor-like E2FE
SwissprotQ8LSZ4.13.6e-74E2F-like repressor E2L3
trEMBLA0A6I9QPZ81.1e-99E2F transcription factor-like E2FE isoform X4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G48160.244.411e-80 296DEL1;E2FE;E2L3DP-E2F-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag114312.t1; g337833.t1; g378978.t1
Allium fistulosumAfisC2G02146; AfisC2G02747; AfisC2G07405; AfisC2G07415
Allium sativumAsa5G01918.1; Asa5G02010.1
Arabidopsis thalianaAT3G01330.1; AT3G48160.1; AT3G48160.2; AT5G14960.1
Oryza sativaLOC_Os02g50630.1; LOC_Os06g13670.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain3710174.25.6e-21
PF02319.17E2F_TDPDomain17625474.64.2e-21

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09391E2F7_8; transcription factor E2F7/8EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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