Detail information of Asa5G02116


Location
GeneChrStartEndStrand
Asa5G02116chr5542072809542093462+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010917733.11.2e-161uncharacterized protein LOC105042291
SwissprotF4IXE7.19.0e-93Repressor of silencing 4
trEMBLA0A6J0PFV18.8e-162uncharacterized protein LOC105042291

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G05380.149.464e-133 473Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag44260.t1; g535925.t1
Allium fistulosumAfisC2G02329
Allium sativumAsa5G02116.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily88095083.39.2e-24
PF00628.26PHDDomain993103430.52.3e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02964RP-S18e, RPS18; small subunit ribosomal protein S18eEC:- Ribosomeko03010

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.