result

Gene information

Detail information of Asa5G02247

Location

Gene	Chr	Start	End	Strand
Asa5G02247	chr5	577171004	577172663	-

Sequences

CDS

Protein

Gene

>Asa5G02247.1
ATGGCAAAAGGAATCAAAGCTCGAAAAATGTCAGTGGTTCAGTGGTTCATGAACTTACCGGATCGTTCATCGTTGTCCGTTAAATCCCCCACTTcagatttaattaacaagttgGAAATCTTTCTCAGTAAAAATTCCTCCACTTGCAAATGGTTTCAGTACGAGGAGTTACAGCTTGCTAGCAACTACTTTTCGAAAGGTCTTTTTCTACAAATTTCGATTTTGGCATATTTTCTAAAATCCTTTTTTGTTATAATAGTTTCTGTGATATTTTGAACAGATTATTTGATTGGAGAAGGTGGCAATAGTCGAGTTTACAAATTAAGGATGTCTTGCGAATGGAGATAAAATTGCTGTCAAGTTATCAAAGTTATCGAATGAGACATCAAAAGATTTTCTTTTGGAAGCTGATATAATTACTAAATTGCAACGTGAACGTATTGTTCCTTTGTTGGGAATTTGTGTTGAATGCAATACGTTTCTTTTGATTTATGGTTATTTCTCCAAAGGAAGTTTAGAGGAAAATCTACATGGTAAAAGTTCTAAATATTGTTTTTTCATCATCACAAATACCTAAAATTTTCAAggctaaatatatttgtttaatttggaAAAATTACAGGAAATTAAATCAAAACTCCATTAGCTTGGGATAAAAGATTTAAAATCGCAGTTGGTGTAGCCGAAACATTGAATTATTTGCATATGGGTTCATCTGAATCAGTTGTGCACAGAGATGTTAAATCTTCAAATATCCTTCTTACTGACAAATTTGAACCACAGGTAAAATTACATTCTAATCAATTACCAGTTTTGTTTTTCCAAATTACCTCATACATATTAAATGAGGAATTTTACATGTGTGTAGTTGGCTGATTTTGGACTGGCTATATGGGCACCAAAGAATTCTTTGTCTGAGACTCAAAGTGAAATTGTAGGGACTTTTGGGTATGTCATTTTGTTGATTTTATCATTATATTAACATGCATTTGGCCTGCTATCTAATTgacaatatatttttaactttttgatAGATATCTTGCGCCTGAATATTTCATGTATGGTAAAGGCAGCAGTAAGATCGACGTCTATGCATATGGTGTTGTTTTGCTTGAATTATTGATTGGTAGAAAACCAATTTCAGATGACAATCCTAAAGGCCAAAAGAGCTTAGTTATGTGGGTAAGATATATCTTTCAATGCTAATTATACTTCTTGATATTGTAAGTCTGAATAGCGTTAATTTTGTGCATGTTGTTAATGTCAGGCCATACCAAGACTAGAAAGAGGAGATCTGAGTGATTGTTTGGATCCAAATATTAATGGGGTTTTCGAAGAGAAGAAAGTAAGAAGAATGATAAAGGTATCATCTTTGTGCATTACACGTACGACGCGACTTAGAACGCAAATGAGTCAGGTACTCAGCCTTTTaaaaggggaagaggaggaggtggtTCGGACATGGCTAAACTCAAAATCAATCATGGAATGCCAAGATGAAGAAGCATATCCTAGCTTGAGCATCGGGTCACATTTGGGACTAGCATTGCTTGATGTTGAAGAAGACGATGCTTCTGAAATTAGCTTCGAACAAAACCAGCTGAACTCTTTAGATGATTACCTGATAGAGAGATGGAGCAGATCTTCAAGTTTTGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK72617.1	7.5e-110	uncharacterized protein A4U43_C04F21270
Swissprot	Q8RXC8.1	2.0e-43	Protein ROP BINDING PROTEIN KINASES 2
trEMBL	A0A5P1F5C3	5.4e-110	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G77280.1	48.89	7e-68	254		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G02247	AT1G77280.1	315	130	8	32	318	483	794	48.89	7e-68	254
Asa5G02247	AT4G35030.3	238	117	2	67	303	200	436	50.00	1e-66	250
Asa5G02247	AT2G16750.1	224	107	2	68	290	370	591	50.89	2e-64	242

Ortholog group

Species	Genes
Allium cepa	g333040.t1
Allium fistulosum	AfisC5G05163
Allium sativum	Asa4G04995.1; Asa5G02247.1; Asa6G03179.1; Asa6G05218.1; Asa7G00717.1; Asa7G07608.1; Asa8G02074.1
Arabidopsis thaliana	AT2G16750.1; AT4G35030.1; AT4G35030.2; AT4G35030.3
Oryza sativa	LOC_Os03g13820.1; LOC_Os03g13820.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	71	238	90.9	7.8e-26

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network