Detail information of Asa5G02477
| Gene | Chr | Start | End | Strand |
|---|
| Asa5G02477 | chr5 | 634198110 | 634247437 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_010921169.1 | 0.0e+00 | E3 ubiquitin-protein ligase SHPRH isoform X1 |
| Swissprot | Q149N8.2 | 1.8e-143 | SNF2, histone-linker, PHD and RING finger domain-containing helicase |
| trEMBL | A0A6I9R7U4 | 0.0e+00 | E3 ubiquitin-protein ligase SHPRH isoform X1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G40770.1 | 47.13 | 0.0 | 1402 | | zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa5G02477 | AT2G40770.1 | 1689 | 784 | 41 | 3 | 1615 | 4 | 1659 | 47.13 | 0.0 | 1402 |
| Asa5G02477 | AT5G22750.1 | 287 | 165 | 5 | 474 | 756 | 481 | 736 | 30.31 | 2e-34 | 145 |
| Asa5G02477 | AT5G22750.1 | 279 | 150 | 9 | 1295 | 1571 | 794 | 1028 | 29.75 | 1e-23 | 110 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00176.20 | SNF2_N | Family | 289 | 758 | 290.6 | 1.1e-86 |
| PF00271.28 | Helicase_C | Family | 1391 | 1517 | 28.4 | 1.5e-06 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15710 | SHPRH; E3 ubiquitin-protein ligase SHPRH | EC:3.6.4.- 2.3.2.27 | - | - |