Detail information of Asa5G02556


Location
GeneChrStartEndStrand
Asa5G02556chr5654436580654467318-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009417723.10.0e+00PREDICTED: E3 ubiquitin-protein ligase KEG
SwissprotQ9FY48.20.0e+00RING-type E3 ubiquitin transferase KEG
trEMBLA0A804KJY10.0e+00RING-type E3 ubiquitin transferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G13530.164.370.02156KEGprotein kinases;ubiquitin-protein ligases

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag358762.t1
Allium fistulosumAfisC2G03067
Allium sativumAsa5G02556.1
Arabidopsis thalianaAT5G13530.1; AT5G13530.2
Oryza sativaLOC_Os05g32570.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14634.3zf-RING_5Domain65229.06.8e-07
PF07714.14Pkinase_TyrDomain14043382.72.2e-23
PF12796.4Ank_2Repeat50558140.33.2e-10
PF13637.3Ank_4Domain58563134.22.4e-08
PF12796.4Ank_2Repeat70478938.98.7e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0005524FATP binding
GO:0006468Pprotein phosphorylation
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16279KEG; E3 ubiquitin-protein ligase KEGEC:2.7.11.1 2.3.2.27 --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.