Detail information of Asa5G02660


Location
GeneChrStartEndStrand
Asa5G02660chr5680083595680084233+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246876.11.6e-60dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD3.11.3e-41Protein TINY 2
trEMBLA0A8K0I3S13.7e-54Dehydration-responsive element-binding protein 3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G11590.149.781e-45 179TINY2Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag181610.t1; g354953.t1
Allium fistulosumAfisC2G04169; AfisC7G02437
Allium sativumAsa3G02960.1; Asa3G02964.1; Asa5G02660.1
Arabidopsis thalianaAT5G11590.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain5710743.13.3e-11

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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