result

Gene information

Detail information of Asa5G02661

Location

Gene	Chr	Start	End	Strand
Asa5G02661	chr5	680381761	680383505	+

Sequences

CDS

Protein

Gene

>Asa5G02661.1
atggTTTTTCCTTCTTCTCTTCCACTCTATCAAGATCCTCCCACTTGGAACCAGGTACTAATCAACTTCCAAAAATCTATTTAAAGTTAGTGAAATATACCATTTTTCCATGAATATACTAATTCCTTTTCATTCTTTTTCCCTCTATTCATTTTTTATATTTCAACCAGGATCAAGTAGTACTCCAGCAACAGCAGCAGCAACAGCAGCAGCTTCAAATTGTTACAGTCCAACCGTCTCGTTCAGATGGAGTTTTAGCACGACCGAACTCCATGGCAGATCGAGCCAGATTGGCAAAGATCCCTCAGCCTGAGCAACCTTTGAAGTGCCCTAGATGTGAATCAACTAATACTAAGTTTTGCTACTTCAATAACTATTCTCTTTCACAGCCAAGGCACTTTTGTAAGTCCTGCCGCCGCTACTGGACACGTGGTGGTGCCATGCGCAACGTTCCAGTCGGTGGTGGCTGCCGTCGTAACAACAAGCGTAACAAGAACTCAGCTGCTGGTAGCTCTTCCAAAAATTCAGGTTTGTTTTATTCACATTTGCCTTGTATTCTATCTTTTCTTTGCCACTTCTTTCTTCCATTCTTATGGTTATTTTATGTATGATTCTTCTATAAATTTAGACAAATATACCTTAGATTTAATTGAAATCTAGGGATTTAGTGGacatactattattattattcccCATTTTTAAGTCGCAGTTGAGATAGTGAATGTGCagtgctttctttttcttttctttttttgttactTGATAATTAATTTACTGTTGAGATATATGGACTCATACTTTATATTCTTGGTATCATtctttatgccattttatgtggTGTGTTATACATATGATTCTTAAACATTTCTTGATCATAAGATAagacttcattttctttttgtCTTAATACGTACATTGACTGATTCCATACATGGACTTATACTATTTCTTCTTGGTATGCTTTACATTTTACACATGATTCTTCCACATTTCTTGATCATAAGATCAGCCATAAAAAGACAATATAAGAGCAGTGCAAACAACTCCTTATAGTTAGCAATTCtgaagttttccattttatttgtATAGAGCGGTTAAGACAGTGAATGCTAAGTGCAGATTTCTTTTTCCAGTGTATACATggtttttttgaattgtttttttacaTGTGTTACATCTTGAAACTAGCAGCTACAGCAGATCGTCAGGCTGGGGACTCATCTGCAACCTCGGCAGGCAATAACGCAGCAAGCTTTCCATTCATGTCGAATTTACATCCAATGATAGACTACACATCACATGTTCCAAACATAGGGTTAGGGTTTTCTGGCATCCCTTCTATGAACGTGGATACATACCAGCAAGGTAATAGTACAAGTATGGGAATGGAGCAATGGAGGCTGAATCAGATACAGCAGTTTCCGTTTCTCGGAGGAATGGAGTCGCAGATGACACAGATGGCACCCGTGTCTGAGATTAACTATCCTTTTGATGCAGCTTCATCTGTCAAAATGGAGGATAATCAAAGAGGGATGAATTTGGCGAGGCAGTATAATATAAATTTGGGTGTCAGTGGTAATACTAATAACAACGGTACAAGGCAGGTTGAACATTATTGGAATGGCGGTGGGGCTGGTGATGAAGGTGGGTCTGATAATGCTACTGGGGATGGTGGCAATGGCAGTGGGAACTGGATGACCAATCTTTCAAGGTTCAATACTTCTTCTGCAGAACATCTGTTGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009402261.1	1.8e-58	PREDICTED: dof zinc finger protein DOF5.1-like
Swissprot	Q9M2U1.2	3.6e-32	OBF-binding protein 3
trEMBL	A0A804JAP4	1.3e-58	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G55370.1	38.62	6e-43	171	OBP3	OBF-binding protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G02661	AT3G55370.1	334	152	13	1	296	1	319	38.62	6e-43	171
Asa5G02661	AT3G55370.3	271	132	9	48	296	100	364	40.96	1e-41	167
Asa5G02661	AT3G55370.2	249	95	10	1	217	1	234	42.97	9e-40	160

Ortholog group

Species	Genes
Allium cepa	g301566.t1
Allium fistulosum	AfisC2G03202
Allium sativum	Asa5G02661.1
Arabidopsis thaliana
Oryza sativa	LOC_Os03g60630.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02701.12	zf-Dof	Family	67	123	109.4	6.4e-32

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16222	CDF1; Dof zinc finger protein DOF5.5	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network