Detail information of Asa5G02884


Location
GeneChrStartEndStrand
Asa5G02884chr5737480161737483069+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020258905.12.0e-94protein indeterminate-domain 12-like
SwissprotO22759.21.3e-79Protein indeterminate-domain 12
trEMBLA0A5P1FDR11.4e-94C2H2-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G02670.152.887e-82 300AtIDD12;IDD12indeterminate(ID)-domain 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag139161.t1; g307190.t1; g421878.t1; g466583.t1; g90843.t1
Allium fistulosumAfisC1G02792; AfisC2G02955; AfisC3G03342; AfisC5G01276; AfisC6G00311; AfisC7G03397
Allium sativumAsa5G02884.1; Asa6G06129.1
Arabidopsis thalianaAT1G03840.1; AT1G03840.2; AT4G02670.1; AT5G44160.1
Oryza sativaLOC_Os01g09850.1; LOC_Os01g09850.2; LOC_Os01g09850.3; LOC_Os01g14010.1; LOC_Os02g45054.2; LOC_Os02g45054.3; LOC_Os02g45054.4; LOC_Os10g28330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12171.5zf-C2H2_jazFamily234523.93.4e-05

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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