Detail information of Asa5G03350


Location
GeneChrStartEndStrand
Asa5G03350chr5873351039873352688-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020242536.12.0e-30zinc finger CCCH domain-containing protein 54-like
SwissprotO65036.17.5e-27Tandem CCCH Zinc Finger protein 6
trEMBLA0A8K0IJY87.0e-30Zinc finger CCCH domain-containing protein 2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G07500.160.001e-27 119AtTZF6;PEI1;TZF6Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag476209.t1
Allium fistulosumAfisC1G05226
Allium sativumAsa5G03350.1; Asa6G04728.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily9912026.24.7e-06

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K07560dtd, DTD; D-aminoacyl-tRNA deacylaseEC:3.1.1.96 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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