Detail information of Asa5G03443


Location
GeneChrStartEndStrand
Asa5G03443chr5901167837901186243+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260044.12.0e-62LOW QUALITY PROTEIN: auxin response factor 17-like
SwissprotQ01I35.29.7e-54Auxin response factor 10
trEMBLA0A7I8KT761.4e-62Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G30080.133.797e-57 218ARF16auxin response factor 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag245982.t1
Allium fistulosumAfisC4G03950
Allium sativumAsa5G03443.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family10920967.19.3e-19
PF06507.10Auxin_respFamily24732444.21.5e-11

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.