result

Gene information

Detail information of Asa5G03838

Location

Gene	Chr	Start	End	Strand
Asa5G03838	chr5	1020906842	1020908446	+

Sequences

CDS

>Asa5G03838.1
ATGGAGCCACAGTTCGTCGCTCCACTTCAAGTGATCGTGCCTAGCAAAGCCCTTACCAATTTGCCATCCGATCCCCATAAAAGGCCGATCAGGAGATCAAACGAAATGGTTCGTATTCCGCACTTGAACCTACAGGATCAATTATATTTTCAAATCTTAGTTCGTAAAACGAGAATAATTTTTGAATCCCTACGAATCTTTTTCTCACGTGAAAGGGAAACTCATCAACATGCAGCTTCCCTAATGAGCGCCCATGGCTTATGGTTGAACCGTCACAAAAGAATTATTGGGTCCATTCCAGGAGTTAATGTGGGCGATATATTCTTTTATAGGATCGAGCTACTCATCATTGGCTTGCATGGTTATAACATAGGAAGTGTAGACTACGTCTCTGCAAGAAAGAGCGAGTATGGTGAACCAATTGCAACTAGCATAATCATTTTAAGCAGGGACAAAGAAAACTGCGATAATGGCGAGGAGTTGATTTACACATGCCCTGTTAAGCGAAGTCAAAAAGCGAATAAGCATAATGCAGGCCAGAAGTTGGAAGCGGACATACTTGCTTTAGAAAGAAGTATGATTAACGATGTTGAAGTTCGAGTTATTAGGGACATGCGTTGTGATTGTAGCCCGACTAAGAAGGTTTACATATACGATGGGCTATACAAGATTGTACAGTGTCTGAAAGAAAAAGCATCCAAATCCGTGTTTGATACTTATAAGTTTAAGCTTTCGAGAATCCAAGGGCAGGAGGAAACATGTAGCTCTAAAATTACTAAAGCTACAAATATGAAGGCTAGTCCACAGCCCGTGAGGCCAGGTGGGCATTTGAGTTTGGATTTGTCCAACAGACAAGAGAGGTTCCCAATATTGTTGTTTAATGATATCAATATGCAAGATGACCCTTCATCATACCAATATACCACTAGACCATTATATGATTTAGACGTATATGATGAAGTATTCAAGAAAACTAGACATGGCTGTAAGTGTGTAGCCATTTGCAGGGAAGATTGTTATTGTGCAACAATGAATGGTGGAGAGTTACCATACGATGTAGATGGCATTCTTAAAAGAGGTAAGCCTTTTATATACGAGTGTGGACGTTGGTGTAGGTGCCCGAGTGACTGTGGCAACAGGGTAACACAGGGAGGCATAAAGAACAACTTTGAAGTGTTCAGAGATTTGACAACAGAATGGGGTGTCAGGTCATTAGATTTCATTAAAGCTGGATCATTTTTGTTTGAAATGAATGGACACATTTTAACCGAGGAAGAAGTTAAATTGAACAAGGTAGAATATAAGAGAAATTTGGTTTATCCCAAAGAATTTCCACCTAGATGGAGGGAATGGGGAGACGTATCGGATTTGTTTCCTGATTATTTGAATCATAGTCATTCTTTTACACCAGAGCTCAATTTTGCAATTGATGTGTCGACGACGAGAGGCGTTGCTACTTATTTAAGTCATAGTGGGGTTAGTCCAAATGTGTTCGTACAATTAGTACTTTATGATCATCATGATCATGCCTATCCTCATCTTATGGTGTTTGCTTCTGAAAATATTCCACCTCTTAGAGAACTTAGCTTCGACTATGGGAGATAA

Protein

Gene

>Asa5G03838.1
ATGGAGCCACAGTTCGTCGCTCCACTTCAAGTGATCGTGCCTAGCAAAGCCCTTACCAATTTGCCATCCGATCCCCATAAAAGGCCGATCAGGAGATCAAACGAAATGGTTCGTATTCCGCACTTGAACCTACAGgatcaattatattttcaaatcttagtTCGTAAAACGAGAATAATTTTTGAATCCCTACGAATCTTTTTCTCACGTGAAAGGGAAACTCATCAACATGCAGCTTCCCTAATGAGCGCCCATGGCTTATGGTTGAACCGTCACAAAAGAATTATTGGGTCCATTCCAGGAGTTAATGTGGGCGATATATTCTTTTATAGGATCGAGCTACTCATCATTGGCTTGCATGGTTATAACATAGGAAGTGTAGACTACGTCTCTGCAAGAAAGAGCGAGTATGGTGAACCAATTGCAACTAGCATAATCATTTTAAGCAGGGACAAAGAAAACTGCGATAATGGCGAGGAGTTGATTTACACATGCCCTGTTAAGCGAAGTCAAAAAGCGAATAAGCATAATGCAGGCCAGAAGTTGGAAGCGGACATACTTGCTTTAGAAAGAAGTATGATTAACGATGTTGAAGTTCGAGTTATTAGGGACATGCGTTGTGATTGTAGCCCGACTAAGAAGGTTTACATATACGATGGGCTATACAAGATTGTACAGTGTCTGAAAGAAAAAGCATCCAAATCCGTGTTTGATACTTATAAGTTTAAGCTTTCGAGAATCCAAGGGCAGGAGGAAACATGTAGCTCTAAAATTACTAAAGCTACAAATATGAAGGCTAGTCCACAGCCCGTGAGGCCAGGTGGGCATTTGAGTTTGGATTTGTCCAACAGACAAGAGAGGTTCCCAATATTGTTGTTTAATGATATCAATATGCAAGATGACCCTTCATCATACCAATATACCACTAGACCATTATATGATTTAGacgtatatgatgaagtattcaaGAAAACTAGACATGGCTGTAAGTGTGTAGCCATTTGCAGGGAAGATTGTTATTGTGCAACAATGAATGGTGGAGAGTTACCATACGATGTAGATGGCATTCTTAAAAGAGGTAAGCCTTTTATATACGAGTGTGGACGTTGGTGTAGGTGCCCGAGTGACTGTGGCAACAGGGTAACACAGGGAGGCATAAAGAACAACTTTGAAGTGTTCAGAGATTTGACAACAGAATGGGGTGTCAGGTCATTAGATTTCATTAAAGCTGgatcatttttgtttgaaatgaatgGACACATTTTAACCGAGGAAGAAGTTAAATTGAACAAGGTAGAATATAAGAGAAATTTGGTTTATCCCAAAGAATTTCCACCTAGATGGAGGGAATGGGGAGACGTATCGGATTTGTTTCCTGATTATTTGAATCATAGTCATTCTTTTACACCAGAGCTCAATTTTGCAATTGATGTGTCGACGACGAGAGGCGTTGCTACTTATTTAAGTCATAGTGGGGTTAGTCCAAATGTGTTCGTACAATTAGTACTTTATGATCATCATGATCATGCCTATCCTCATCTTATGGTGTTTGCTTCTGAAAATATTCCACCTCTTAGAGAACTTAGCTTCGACTATGGgagataa

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020262180.1	9.2e-153	histone-lysine N-methyltransferase family member SUVH9-like
Swissprot	Q9T0G7.1	1.8e-113	Suppressor of variegation 3-9 homolog protein 9
trEMBL	A0A199VTA2	3.9e-145	Histone-lysine N-methyltransferase family member SUVH2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13460.1	42.42	9e-119	424	SDG22;SET22;SUVH9	SU(VAR)3-9 homolog 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G03838	AT4G13460.2	521	280	7	28	533	122	637	42.42	9e-119	424
Asa5G03838	AT4G13460.1	521	280	7	28	533	122	637	42.42	9e-119	424
Asa5G03838	AT2G33290.1	514	286	6	32	533	130	638	41.05	3e-114	409

Ortholog group

Species	Genes
Allium cepa	g341968.t1
Allium fistulosum	AfisC6G05981
Allium sativum	Asa5G03838.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02182.14	SAD_SRA	Domain	96	250	113.0	9.1e-33
PF05033.13	Pre-SET	Family	282	380	59.0	5e-16
PF00856.25	SET	Family	400	533	41.5	1.6e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0042393	F	histone binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0034968	P	histone lysine methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Lysine degradation	ko00310
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network