Detail information of Asa5G03974


Location
GeneChrStartEndStrand
Asa5G03974chr510530850931053092257+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267885.13.9e-55squamosa promoter-binding-like protein 12
SwissprotQ5Z818.12.1e-45Squamosa promoter-binding-like protein 12
trEMBLA0A5P1EU732.8e-55SBP-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G27370.155.001e-35 147SPL10squamosa promoter binding protein-like 10

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag520931.t1
Allium fistulosumAfisC3G04548; AfisC7G00594
Allium sativumAsa2G03609.1; Asa5G03974.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g07780.1; LOC_Os02g07780.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12899.4Glyco_hydro_100Domain5610433.61.5e-08
PF03110.11SBPDomain223296102.59.6e-30

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0033926Fglycopeptide alpha-N-acetylgalactosaminidase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13415BRI1; protein brassinosteroid insensitive 1EC:2.7.10.1 2.7.11.1 Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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