Detail information of Asa5G04008


Location
GeneChrStartEndStrand
Asa5G04008chr510635692611063575639-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020266953.18.1e-55LOW QUALITY PROTEIN: uncharacterized protein LOC109842496
trEMBLA0A4S8IIQ74.6e-52Bromo domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G60110.134.578e-54 208DNA-binding bromodomain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag215233.t1; g237343.t1
Allium fistulosumAfisC4G04714; AfisC5G05582
Allium sativumAsa5G03205.1; Asa5G03206.1; Asa5G04008.1; Asa6G05505.1; Asa6G05506.1
Arabidopsis thalianaAT2G42150.1; AT2G44430.1; AT3G57980.1; AT3G60110.1
Oryza sativaLOC_Os08g39980.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain146336.63.3e-09
PF00439.22BromodomainDomain24732042.44.9e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11321BRD8; bromodomain-containing protein 8EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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