Detail information of Asa5G04059


Location
GeneChrStartEndStrand
Asa5G04059chr510833563461083368715+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265511.13.5e-111chromatin remodeling protein EBS-like
SwissprotF4JL28.12.1e-97Protein EARLY BOLTING IN SHORT DAYS
trEMBLD6MKD61.9e-111Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G22140.275.004e-101 363EBSPHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag520733.t1
Allium fistulosumAfisC4G04764
Allium sativumAsa5G04059.1
Arabidopsis thalianaAT4G22140.2
Oryza sativaLOC_Os08g32620.1; LOC_Os09g21770.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01426.15BAHDomain2313589.31.5e-25
PF00628.26PHDDomain14018841.01.1e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03283HSPA1s; heat shock 70kDa protein 1/2/6/8EC:- Spliceosomeko03040
Protein processing in endoplasmic reticulumko04141
MAPK signaling pathwayko04010
Endocytosisko04144
Antigen processing and presentationko04612
Estrogen signaling pathwayko04915
Longevity regulating pathway - multiple speciesko04213

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.