Detail information of Asa5G04069


Location
GeneChrStartEndStrand
Asa5G04069chr510876017671087609205-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265529.19.4e-41zinc finger CCCH domain-containing protein 33-like isoform X3
SwissprotQ941Q3.12.1e-16ENHANCER OF AG-4 protein 1
trEMBLD6MKK53.6e-42Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04990.141.566e-38 154Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag269513.t1
Allium fistulosumAfisC4G04776
Allium sativumAsa5G04069.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily93434.99.2e-09
PF00642.21zf-CCCHFamily13916437.91.1e-09
PF00642.21zf-CCCHFamily18420930.22.7e-07

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03260EIF4G; translation initiation factor 4GEC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.