Detail information of Asa5G04096


Location
GeneChrStartEndStrand
Asa5G04096chr510933256121093326381+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF6161766.16.6e-21hypothetical protein GIB67_013843
SwissprotQ5VPE3.16.0e-19Homeodomain transcription factor HOX2
trEMBLA0A7J7N3T64.7e-21Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G06710.148.854e-22 101HAT14homeobox from Arabidopsis thaliana

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag80607.t1
Allium fistulosumAfisC4G04891
Allium sativumAsa5G04096.1; Asa5G04097.1; Asa5G04181.1; Asa7G05806.1; Asa7G05807.1; Asa7G05808.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain7513152.52.9e-14

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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