Detail information of Asa5G04165


Location
GeneChrStartEndStrand
Asa5G04165chr511132477331113253853-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265583.11.0e-122floral homeotic protein APETALA 2
SwissprotP47927.11.0e-90Floral homeotic protein APETALA 2
trEMBLA0A5P1EYR32.1e-117Polyadenylate-binding protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G36920.158.909e-82 300AP2;AtAP2;FL1;FLO2Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag256880.t1; g329877.t1
Allium fistulosumAfisC4G04821
Allium sativumAsa1G03964.1; Asa2G01500.1; Asa2G02444.1; Asa2G02445.1; Asa3G00682.1; Asa3G00683.1; Asa5G04165.1; Asa5G04167.1; Asa8G03944.1; Asa8G04167.1
Arabidopsis thalianaAT3G54990.1; AT3G54990.2; AT4G36920.1; AT4G36920.2; AT5G67180.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain509936.73.4e-09
PF00847.17AP2Domain14219241.79.3e-11

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09284AP2; AP2-like factor, euAP2 lineageEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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