Detail information of Asa5G04192


Location
GeneChrStartEndStrand
Asa5G04192chr511222321571122252344+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265901.11.7e-75uncharacterized protein LOC109841375
SwissprotQ38JA7.16.9e-05[histone H3]-trimethyl-L-lysine(4) demethylase 5C
trEMBLA0A5P1EXF71.2e-75PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G19260.141.903e-40 162RING/FYVE/PHD zinc finger superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag231969.t1; g443577.t1; g73233.t1
Allium fistulosumAfisC2G07312; AfisC4G04907; AfisC6G05097; AfisC7G01130; AfisC7G01761
Allium sativumAsa2G05576.1; Asa3G03467.1; Asa5G04192.1; Asa6G04436.1
Arabidopsis thalianaAT2G19260.1
Oryza sativaLOC_Os04g34720.1; LOC_Os04g34720.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain13718238.01e-09
PF01448.21ELM2Family21933727.83e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17586PHRF1; PHD and RING finger domain-containing protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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