Detail information of Asa5G04413


Location
GeneChrStartEndStrand
Asa5G04413chr511963126611196313204-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK82022.11.3e-50uncharacterized protein A4U43_C01F35330
SwissprotQ9XE33.11.1e-49Transcriptional activator HAP5D
trEMBLD6MKI81.0e-52Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G54830.180.181e-50 196NF-YC3nuclear factor Y, subunit C3

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Ortholog group
SpeciesGenes
Allium cepag86980.t1
Allium fistulosumAfisC1G05167
Allium sativumAsa5G04413.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain6813176.01.8e-21

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0016602CCCAAT-binding factor complex
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08066NFYC, HAP5; nuclear transcription factor Y, gammaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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