Detail information of Asa5G04569


Location
GeneChrStartEndStrand
Asa5G04569chr512369258721236934227+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020254553.12.2e-111AP2-like ethylene-responsive transcription factor At2g41710
SwissprotX5HYT8.11.7e-92Protein SMALL ORGAN SIZE 1
trEMBLA0A8B7CMX84.7e-111AP2-like ethylene-responsive transcription factor SMOS1 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G41710.148.668e-74 274Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag427583.t1
Allium fistulosumAfisC1G03115; AfisC1G09341; AfisC2G02589; AfisC4G05516; AfisC4G05524; AfisC5G00740
Allium sativumAsa5G00644.1; Asa5G04569.1; Asa6G05486.1; Asa8G00785.1; Asa8G04419.1
Arabidopsis thalianaAT2G41710.1; AT2G41710.2; AT2G41710.3
Oryza sativaLOC_Os05g32270.1; LOC_Os05g32270.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain8313934.91.2e-08

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09285OVM, ANT; AP2-like factor, ANT lineageEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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