Detail information of Asa5G04597


Location
GeneChrStartEndStrand
Asa5G04597chr512431916451243194947+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245915.14.5e-54LOW QUALITY PROTEIN: protein PHR1-LIKE 3-like
SwissprotQ8LAJ7.11.4e-39Protein UNFERTILIZED EMBRYO SAC 16
trEMBLA0A1D1XSR85.9e-48Myb family transcription factor APL

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G13640.150.205e-60 227UNE16Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag513488.t1
Allium fistulosumAfisC4G05577
Allium sativumAsa5G04597.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain227331.71.2e-07
PF14379.3Myb_CC_LHEQLEFamily12016382.88.9e-24

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14317NUP214, CAN; nuclear pore complex protein Nup214EC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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