result

Gene information

Detail information of Asa5G04632

Location

Gene	Chr	Start	End	Strand
Asa5G04632	chr5	1252549002	1252552551	-

Sequences

CDS

Protein

Gene

>Asa5G04632.1
ATGAACATTATCCACATTCTGTTCATCATCTCTCTTTTCTCTCCTTTCACAAATTCTCTAACTCCTGATGGGCTAACTCTCTTAGCCTTCAAATCAGCCATATCTTCGGATCCACTGTCCTCCCTATCAACCTGGACCGAAGACTCGACCGACCCATGCAAATGGCCAGGAATCTCATGTGCAAACATACCAAATTCTCCAGAGCCTCGAGTCATCGGCATTGCAGTTCCAGGCAAAAATCTCTCTGGCTACCTCCCTTCAGAACTCGGCACTCTTCTCTATCTACGTAGActgaatcttcatggaaatcgcCTATCAGGCTCCATTCCATCTCAGCTATTCAACGCTTCATCTCTGCACTCCATCTTCTTATACAATAACAATCTTTCAGGCTCATTGCCTAAAGAAATCTGCAACCTTCCCAGAattcaaaatcttgatttttcaagAAACCTTATAGCAGGCTCTGTTCCTTCTGAATTACAAAACTGCAAGCAACTAGAGCGGCTTGTCCTTTCCGGAAACAATCTTTCAGGGCAGTTGCCTTCCGGAGTATGGCGGCAGATGCTTAGTTTGGTTCAGTTAGATTTATCCTCCAATTACTTAACTGGAGAAATTCCTGAAGACATAGGCTACTTAAATTCATTATCTGCGACTTTAAATTTATCGCATAACAGTTTTTCAGGTAAGGTTCCAAGCTCGTTAGGGAACCTGCCTGCAACGGTGGGTCTCGATCTCCGTTATAACAATCTTTCAGGTGAGATTCCAGACACTTTGGAAGATCAAGGCCCAACGGCTTTTCTTAATAACCCATTTCTATGTGGAGCTCCGTTGCACGTACAATGTGAAAGCAAAACCGAACCTGTTTCAAAACCGAATGTATCATACGATTCGAGTGGTAGTGCTAAAAAAGGTATAAAGTCGAGTTTGATAGTGTTGATATCTGTAGGAGATGCAGTAGGAGTAGCTTTCATAGGACTGGTTTTGGTTTACATATACTGGAAATTGAAAGATGGTAATGACATTGAATGTGGGAAAGAAAAGAGGACCAATAGCAGAAAATGCTGGAAGCAGAATGCAGGTGAATGCacagaggaggaagaggaggaggaggaggagaacggAGAAGGGAAGTTAGTGGCTATTGACAAAGGGTTCAAGTTTGAACTGGATGAGCTGCTGAGAGCTTCTGCTTATGTGTTAGGGAAAAGTGGAATGGGAATAGTATACAAAGTGGTTTTGGGCAATGGAATTCCTGTTGCGGTTAGGAGGGTTGGAGAAGGAGGAAGGAGCGGGCAGAAGTATAAGGAGTTTGCGAACGAGGTACAGGCGATAGCCAGAGTGAGGCATAGGAATTTGGTGAGGCTGAGGGCTTATTACTGGGCACCTGATGAGAAGTTGCTTATAAGTGACTTTATTTCTAATGGCAATCTTGCTTCTGCTCTTAAAGGTTAGTTGTGTTTTCCTTAATGTTTTGTTTTGCTTGCAAAGTGTTATAATTTTTAACTGTTTGATGAGAGTTAATTTGACGGGGAAAGAAGCACACTGAAGTTGAAAGCTTCTCATTATGGTGGTGTAAGTGGGGGTAGTTTTTTATGATATTAAATTCTATTGCACACAAGAAAAAAACATTGTTTTCTCATGCAGTTATGGGAATTGAATTGCACATTCATTACATTGTCTATAAGGAAACAAGCATACTGAGAAATTATTTGACCAAGGTCCATGTCTCTTAAGTTTTATTAGAACTGTATTGTTTCcagattcagttgaaactgaacaGTTAAAAACACAGATGCCATTTTGACTGAAGCTACAATCTGAGCAGAAATTATAGGAGTTGTTAGGGaaattattcaatataaatacCTAATGTTGCCTTGAATTACACCACACTTGTTAAGAAACAAAGGAATGTGCCAAAACCTAACACTGTTTTCTATTCCTGAAAACGTGACACTAATCAATATTTTCCATTCGACCACTGTTTAATGCCTTATATTCTGTTACTTCTGCAGCTGAATAATGACTTTTTGATTGCTTGTCACAACCAAACTTCTATTATAGCATATACTTTACTTGTGTGTATATATTGACATTAGACTAAACTTCTGGTATTGCTTTACATTTtagtttcaatattaaatttaacctTTGATGttcattttgttttctagtttttcttttttcCCCAAAAATATCTATAAACACtttttaatgatgatgatgataatgcgAATGTGAGGATCAAGCAGCTAAATTTTGTATCCTAAGTGGTATGAATCTATGGGGAAAAAGATAAATACCTAACGTTACTTACATTAGTGTAGCCAACCTGCACTAGTTAGGCAAAAAATGAATTCAGATTTGGTCAGAGGTCAAATTTTTACCTAATCTCATCAATTCAAAGTTAAGCTTAGCACATGACATATACATCCAAATATACTGCTTCCTggtcaattatttttatttaatgtatttgttTTTATCTGATGGAGAATTTGATAATGATActgttatattatttaattgttgacaaTTACCGTGTTGTTACCCTAGACAGATTTGCTTTTATCAACTTAGCTACTTTTCTGCAATTTTCACCCAATCTGTGTgcacttgtatttatttatttatttttaaatcgagtattttatatacaattttagatagtatataacatactacacgACAAGTGGGTTGAAACTCGCAAAACGGGAATCAAACTCGTCATCTCTTATACCGTGTTCTAGCGTCTTAACCATTTTGGACAAGATGCTGGTTTTTTATATTAGTATAACATTGAAGTatataatttcataaattaattttatataatttcatacaTTAATTTTCAACACTGATCACTTCCTATGTCTTACAAACAGCCCGGCCAGGTCAACCTACCCTATCATGGTCATTACGGCTTAAAATAGCAAAAGGAACAGCCCGTGGGCTAGCCCACCTCCACGAATGCAGCCCAAGAAAATTCATCCACAGCGACATAAAACCGTCAAACATCCTCCTAGACAACAGCTGCAACCCTTACATATCCGACTTTGGGCTAATCCGGCTCATCAACATTTCAGGCCCAACCAACCCGTCCAGCTCATCTTCCTCTTTGGGCTTCATCAACAACACATTTTCATCCACAAGATCAGCTCTAGCTGAACGGTCCAACAACATATACCGGGCTCCAGAGGCCCGAGTACCCAGAGCCCGGCCCACTCAAAAATGGGACGTCTACTCCTTTGGGGTCGTGCTGCTAGAAATGCTGTCTGGGAAATCGCCAGACTTGATGACATCACATTCGATGGCGACAACATCAGTGTCGCCGCCTACTGAAGATTTGGTAGGCTGGGTAAGAAGAGGGTTTGAGGAGTCGAGGCTTTTGTCAGAGATGGTGGACCCTGCTTTGCACGCAGAAATGAATGCAAAGAAGGAGATCGTTTCTGTGTTTCATATCGCACTTGCATGTACTGAGACTGACCCAGAGGCAAGGCCCAGGATGAAGAATGTATCAGAGAATCTTGATAGAATTGGATCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	PKA57777.1	2.4e-161	putative inactive leucine-rich repeat receptor-like protein kinase
Swissprot	Q9ZU46.1	6.4e-90	Protein ZYGOTIC ARREST 1
trEMBL	A0A2I0AQF0	1.8e-161	Putative inactive leucine-rich repeat receptor-like protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G67510.1	59.63	0.0	809		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G04632	AT1G67510.1	701	262	7	19	701	22	719	59.63	0.0	809
Asa5G04632	AT2G01210.1	715	347	13	20	701	21	711	43.50	3e-159	559
Asa5G04632	AT1G25320.1	728	361	15	1	701	1	699	42.72	6e-156	548

Ortholog group

Species	Genes
Allium cepa	g105214.t1
Allium fistulosum	AfisC4G05606
Allium sativum	Asa5G04632.1
Arabidopsis thaliana	AT1G67510.1
Oryza sativa	LOC_Os12g13300.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	22	60	43.2	3.3e-11
PF00069.22	Pkinase	Domain	400	620	108.0	4.6e-31

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network