result

Gene information

Detail information of Asa5G04737

Location

Gene	Chr	Start	End	Strand
Asa5G04737	chr5	1285314514	1285315974	+

Sequences

CDS

>Asa5G04737.1
ATGGTTGCTTTAGGAAACAATAGAACTTGTGTCCTTGATAATGCAGCTATTGTACATTGTTGGGGTGAAAATATCAAAGTCCCTAGCGATCTTGTTACTGCTCAATTTGTGAACATTCAAGCACGGGGAGATGATTTTTGTGGTGTTTTAATGACGAATTATTCTATGATTTGCTGGGGAAGTGAGAACTTCAATAGTTCAAATCATGTTGTTTTCAAACGAGTGTTGCCTGGAGTATGTGCTTCTAAATGCCCATGTCTTCCACTTTCCGGTTCTGGACCTTTTTGCAGCCATGGCCAATTTATCTGTAGCCCATGCCGGAATTCAATCAAAGTTAACAATTCAACCACCGTTGACAAATCATCTACAACCAGTGATAATCACAGAAGGAACCTGATCTTCATAATCCTCGGTTCAGTCGTTGGTTTTTTCGTAGGCTTAATTTCAGTTGCAAGCTTCATATTCTTCAAAATCAAGCAGAAGCGCAGTAGAATTCACGACTCGGTCAGACTAGGCAATCGAAACAGCTTCCGATCTCTGTTTGAATCGAGCTTAGACGTGCAAATAAGACAACTATTCACCAAAGGCCACAACTCGACAATCGAAGAGTTCTCTATAAGTTACCTATCCTCGATCACCAACAACTTCTCAGACGATCACAAGATTGGTTCAGGCAGTTTTGGTTCGGTTTACCGTGCAAAACTAAAAGATGGAAGAATCGTCGCAATCAAACGCGCTGAAATATCGACCTCAGCTTCCACATCACGTGCACGTACCCCAAACGGGGGCAAAAGCCGACGCCAGGACAAAGAATCGGCCTTCTGCTCCGAGGTCTCCCTCCTATCCCGAGTCAACCACAAAAATTTAGTGAGACTCTTCGGCTACTGCAAAGAAGGATTCGAACGAATCCTTGTATATGAGTTCATGACCAAAGGAACTCTTCACGACCTCCTTCACAAAACCGACGGCTCAACGCTCGACACTTGGACGGCTCGGATCAAAGTCGCCTTGGACGCCGCTAGAGGAATCGAGTACTTGCACACCTATGCCGTGCCACCCATTATCCACCGTGATATAAAGTCGTCAAATATTCTGTTGGACGAATCAAATGTGGCTAAAGTTTCAGATTTCGGGCTTTCGATACTGACTCCGGACCCCAATCGTGTTAACGAAACAAACTGTTTCGATTTTCCACTTGTGACAGCAGGTACGGTTGGGTACATGGACCCGGAATATTATAGACTGAGGCAGTTGACTGCGAAAAGCGACGTGTATAGCTTTGGAGTGGTTCTATTGGAGATACTTTCGGGGTGTAGGGTGATACAAAAGTATGAAGAGAGCGGGACGCCGAAGAACGTGGTGGAGTACGCTGTCCCGCATATTCAGGCTGATAACATACAACATGTGCTGGATGGAAGAATTGCATTGCCTACGCCTAGGGAAATGGAAGCTGTAGCATAT

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246790.1	2.5e-157	LOW QUALITY PROTEIN: serine/threonine-protein kinase-like protein CCR4
Swissprot	Q9FIJ6.1	9.5e-93	Protein CRINKLY 4 RELATED 4
trEMBL	A0A804IDG9	4.1e-125	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47850.1	45.67	1e-108	390	CCR4	CRINKLY4 related 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G04737	AT5G47850.1	497	237	12	2	487	229	703	45.67	1e-108	390
Asa5G04737	AT3G55950.1	529	251	13	7	485	251	762	39.89	6e-81	298
Asa5G04737	AT3G59420.1	516	255	17	13	485	279	757	35.08	5e-69	258

Ortholog group

Species	Genes
Allium cepa	g301431.t1
Allium fistulosum	AfisC4G05738
Allium sativum	Asa5G04736.1; Asa5G04737.1
Arabidopsis thaliana	AT5G47850.1
Oryza sativa	LOC_Os04g35890.1; LOC_Os08g01830.1; LOC_Os11g11490.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	217	454	150.4	5.5e-44

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network