Detail information of Asa5G04814


Location
GeneChrStartEndStrand
Asa5G04814chr513127627041312781062+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020270943.10.0e+00methyl-CpG-binding domain-containing protein 9-like
SwissprotQ9SGH2.10.0e+00Methyl-CpG-binding protein MBD9
trEMBLA0A5P1FNI30.0e+00MBD domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G01460.136.790.01231ATMBD9;MBD9methyl-CPG-binding domain 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag54886.t1; g54887.t1
Allium fistulosumAfisC4G05826
Allium sativumAsa5G04814.1
Arabidopsis thalianaAT3G01460.1
Oryza sativaLOC_Os02g09920.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain6911530.71.9e-07
PF00628.26PHDDomain1225127240.51.6e-10
PF15612.3WHIM1Family1307134640.21.6e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005634Cnucleus
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K00278nadB; L-aspartate oxidaseEC:1.4.3.16 Alanine, aspartate and glutamate metabolismko00250
Nicotinate and nicotinamide metabolismko00760

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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