Detail information of Asa5G04884


Location
GeneChrStartEndStrand
Asa5G04884chr513317994481331831639-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265666.11.4e-127uncharacterized protein LOC109841184 isoform X1
SwissprotQ1DR06.16.7e-34SET domain-containing protein 1
trEMBLA0A5P1F1T31.0e-127Histone-lysine N-methyltransferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G42400.141.147e-30 130ATXR7;SDG25SET domain protein 25

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Ortholog group
SpeciesGenes
Allium cepag315188.t1
Allium fistulosumAfisC4G05874; AfisC4G05875; AfisC6G02414
Allium sativumAsa5G04884.1; Asa5G04885.1
Arabidopsis thaliana
Oryza sativaLOC_Os09g38440.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13831.3PHD_2Family75378534.97.1e-09
PF00856.25SETFamily922103070.61.8e-19

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11422SETD1, SET1; [histone H3]-lysine4 N-trimethyltransferase SETD1EC:2.1.1.354 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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