Detail information of Asa5G05196


Location
GeneChrStartEndStrand
Asa5G05196chr514040480151404068904+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020277219.11.4e-203serine/threonine-protein kinase prpf4B isoform X1
SwissprotQ13523.31.2e-108PRP4 pre-mRNA-processing factor 4 homolog
trEMBLA0A822YL943.3e-204non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G25840.259.290.0 697Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag156922.t1; g251934.t1
Allium fistulosumAfisC4G06162; AfisC8G02348
Allium sativumAsa1G02886.1; Asa5G05196.1
Arabidopsis thalianaAT3G25840.1; AT3G25840.2; AT3G53640.1
Oryza sativaLOC_Os12g44330.1; LOC_Os12g44330.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain643957161.32.5e-47

Gene Ontology
AccessionOntologyName
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0005524FATP binding
GO:0006468Pprotein phosphorylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08827PRPF4B; serine/threonine-protein kinase PRP4EC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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