result

Gene information

Detail information of Asa5G05295

Location

Gene	Chr	Start	End	Strand
Asa5G05295	chr5	1432676897	1432679264	-

Sequences

CDS

Protein

Gene

>Asa5G05295.1
ATGAAGCTGGGTGCATCAGTTCATAAAGGAAGAATTGGTGAAAGCGACTTAGTGATCAAGAAAATGGGATTTGGAGATGCAAGAAAAACAATCAGTATACACTCGAAGATCAACCATTCAAGCATAGTGAAATTGGATGGTGTTTGCTATGGAGATGATGAATTTTCTTCCTCGTATTTGGTATTTGAGCATGCACGAAATGGGTCCTTGAGAAACTGCTTACAAAACAAAATGGAAGTTCTAACATGGCAAAAGAGGGCACAGATTGCTTTAGATGTTGCAATGGGTCTGCAGTACATACATCACTGCACAACCCCGTCTTACATTCATATGAATATCAGCAGCAAAAATATATTGCTCACAGAGGAGTACAGGGCGAAAATTGCGAATTTGGGTTTAGGCTACGATGCTATTGCTTCAGAAGGATGGGTTGCACCAGAATACATCCGTTATGGATTTGTATCGACGAAGATTGATGTGTTTGCCTTTGGGGTTGTCCTGTTTGAGATTTTATCAGCAAAAGAAGTCAGAGATAAAAACATCATTGAAAGATTGTGTTTCTTGAATGGCGAAGGAGGCGGTTTAAATGGCTGCTTCGATGAGCTTAAAATGTTGATAGATCCGAATCTCGATGATTATCCGATAGGAGATGCTCTGTGTATGACTGTCCTGGCCAAATGTTGCCTGGATGAAAATCCTATGCATCGTCCCTCCATGAATGACGTAATGAAGGTTCTTTCTAGAATGGTAAGGTGAgattgaatttgatatgtttgttgAAAGTTGAATGAAAAATGTGTACCTTGTCCTTAGTTTTTCAACTTAACGATCAGCTTTCTATTAACAAACCAAATGGTTATTCAACGGCTTTATTAACGGCTTCTGTCCCTTATAGCGATTTTTGAGCTTCCTCTTCCCCTGCTGCTTTCTGCTCTTGTTCTCTTTCTGTTTTCGACTACTTCCGCTCTATTGTGCTCTATGCTGTCCCGCTACCCTTGTTGTGTCCCTTTCGGCTTCCCTTTGTGAGCTGCTGCGTTCTTTTTTGGGCCTATTAGGGTAATATGGCATCGGATTTTTCTGATTTGGGATTTTGTGCTACTGTTGTGGGCTTATACCGTtcgaaataataatttgaaatttatctttattagTTTATGAAGTTTAGACGTCAGTTCGTAAGTGATGTGTCTTTTATAGTTAAGAGTCATATTAAAGTTTATGTGTTTTTTAGTAAAGTGCGATGTCTATTAAATGAAGTGACATGTAAGTCTCTCtatataaagcctatcattttggttattatgtaagaaagaaagtaagaaaattaagtatcctcctcctctttaattccaacaaactggtatcagagcgtcaggttgaaactatggcaatgctatttttttcgtcgttcgttctcacaaaagaaaatttcgaagagttgagtaataaaaagaaagaagaattgatctccaaagggctttgggagatcgttgagaatggctatgagtggccaaaagatgtcaaaaatatgacggagaaagagagtgagacATTTATAAGTTTGAGACGGAAAGATCATCAAGCTCATGTTGTTATGTGTGAGAACattgatgaagaagctttcgaccagattattggagaaaaatccgcaaaagaATCGTGGGTTTTATTGAAAGAGACTTATGGGAAGGAGGATGAGAAGAAAAATAGTGAGGAGAAGAGAGATGTTGAAGTCGAAAAATTAGAAGATAAGGTTGCTGATGAGGAGTCAGTACAAATGATCATTGCAGATCATGTTGATGAGACACAAATGGAGAATAAAAAAAGAGAGGAAGCCATCAACGATGAAAACAAAGGAGGAGTTGAAGAAATTGAGGATAGAAGTAATGAAAGAAATGAGTGCGATCCCTGTAAGCTCGAGAACAGAAAATTGAAAGCACCATCAGATAAAGTCCATGTTAGTAAAGTTGACAACAACCAAAAATGCATGTGGCATAACCACAAGAGCAAGTGTACTAGAACTTTCACTGTTGCAGAATTGCAAGCTTACAAAGCGGAGAAAGTGAATTCAGATGAAGACGTGGCTTCAAATGGTACATGTAAAAAGGTTACTGTGCCTGTTGGAACCAAAAGTGAAGAAAGCAAGGATGTGATCATCGGCAATTTACTTGATCCACAATTAAGGTCTGCACTTAAGTCGATCGGGTGGCAAGACGGTGACATGAATGCTCAGTCTTCTATGAAGGAGGAGGCGAAAATGGATGTGGATGAAAGGGAAAGAAGTCTTTTGGAGGATATGATCAAGGCAGAGAAAGTTAGAGCGCTTAACTTGAAAGGGAAACAAGCTGGAGCCATAAAAATGCATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249435.1	4.4e-92	lysM domain receptor-like kinase 4
Swissprot	O22808.1	1.1e-39	LysM-containing receptor-like kinase 5
trEMBL	A0A5P1E3H9	3.1e-92	Protein LYK5-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G33580.1	36.26	2e-40	162	LYK5	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G05295	AT2G33580.1	273	147	7	2	251	377	645	36.26	2e-40	162
Asa5G05295	AT3G21630.1	258	126	8	19	251	348	595	37.60	9e-38	154
Asa5G05295	AT2G23770.1	244	128	6	18	250	377	601	35.25	4e-35	145

Ortholog group

Species	Genes
Allium cepa	g538375.t1
Allium fistulosum	AfisC4G06258; AfisC4G06268
Allium sativum	Asa5G05295.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	29	174	96.5	1.4e-27

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13429	CERK1; chitin elicitor receptor kinase 1	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network