result

Gene information

Detail information of Asa5G05557

Location

Gene	Chr	Start	End	Strand
Asa5G05557	chr5	1500124394	1500125968	-

Sequences

CDS

Protein

Gene

>Asa5G05557.1
ATGGTTCAAGCGAAGATGACATGGACTATGAAGGCAGCAGAAGAGGCAGAGGCGGTGGctaatataaactgttcagagcaTGGAAGAGCTTTTCTGGATGGAATTATTTCGGAGGGCTCTCCTAAATGCGAGTGCAACACTTGCTACACCGGTCCGGATTGCTCTGAAAAGATCCAAGGTTGCTCTGCTGATGTTGCCAGGTACGTACGGTTTATATAATTCGATTCTTCTAGTACGTTGATCTCTACTTCACAGttcacacacacactatatataatatCAATGTAGCTATAGCTAGTAATATGCGCATCGAAATTAAAGACATTCATTATACATGCATAATTAAATTGAAGAATTATTGAAAACAATACATGGTGGTACACTACATGATGCATGCAGCGGTGACGGACTGTTCCTAGAGGAATACTGGAAGCAGCACAAGGAAGCCAGTGCAGTGCTGGTTTCACCATGGCACAGAATGAGCTACTTTTTCAACCCAGTCAGCAATTTCATATCTTTCGAGCTTGAAAAAACAATTAAAGAACTACACGAGGTAGTGGGAAATGCTGCTGCAAAGGACAGGTACATTGTGTTTGGAGTAGGGGTCACTCAACTCATCCATGGACTCGTCATCTCTCTTTCACCAAATATGACTGCCACTCCCGACGCACCAGAATCTAAAGTTGTTGCTCATGCCCCTTTTTATCCGGTAggtaaccatatatatatatatatatatatatatatatatatatatatatatatatatatgtgtgtgtgtgtttcttaaTTACTTGAACTACAAACGTAATATATATTGGCACACATCGATCTAACGTACGATCATGCAAACGAATTAAACGATACAGGTGTTCAGAGAACAAACAAAATATTTTGACAAGAAAGGATACGTGTGGGCCGGAAATGCAGCCAATTACGTGAACGTTTCAAACCCAGAGCAGTATATTGAGATGGTTACTTCACCTAATAACCCAGAAGGTCTGCTTCGCCATGCAGTAATCAAGGGATGCAAATCCATTTACGATATGGTTTACTACTGGCCTCATTACACCCCAATCAAGTACAAAGCCGATGAAGATATCTTGCTGTTTACAATGTCTAAATTCACTGGACACTCTGGTAGTCGATTTGGGTATGTCTACATATACCATTCGGTTAACCTGATCACATCTTTTTCTCTACCTATAATTAACATACTTAAGTTGATTAGTAACTCGCTCAATCATACTAATTGGATATCCTATTGAATTAGGTGGGCGTTGATAAAGGATGAATCTGTGTATAATAACTTGTTGAATTACATGACAAAGAACACGGAGGGCACGCCTCGTGAAACACAACTACGATCGCTCAAAGTTCTAAAGGAAGTTGTAGCAATGGTGAAAACGCAAAAAGGCACCATGCGTGACCTCAACACATTCGGTTTTAAGAAACTAAGGGAGAGATGGGTCAATATCACTGCACTGCTGGATCAGTCCGACAGATTCTCCTATCAAAAGCTTCCTCAAAGCGAATACTGCAATTACTTCAGAAGAATGAGACCTCCATCCCCAT

Functional annotation

Database	accession number	e-value	annotation
nr	ACL31075.1	1.3e-181	alliinase, partial
Swissprot	Q41233.1	7.7e-184	Cysteine sulphoxide lyase 2
trEMBL	D2CXF4	9.1e-182	Alliinase (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	39.56	6e-75	277		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa5G05557	AT1G34060.1	364	162	7	7	320	33	388	39.56	6e-75	277
Asa5G05557	AT1G34040.1	361	163	6	7	320	33	386	39.89	5e-70	261
Asa5G05557	AT1G23320.1	303	146	7	64	320	27	322	34.32	2e-49	192

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	7	61	89.6	1.1e-25
PF04864.10	Alliinase_C	Domain	128	320	302.7	2.8e-90

Gene Ontology

Accession	Ontology	Name
GO:0016846	F	carbon-sulfur lyase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14548	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4	EC:-	Ribosome biogenesis in eukaryotes	ko03008

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network